Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 CT010480.4-201ENSMUST00000224654 2283 ntBASIC12.09□□□□□ -0.47
Pcdh18Q8VHR0 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh18Q8VHR0 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh18Q8VHR0 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh18Q8VHR0 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh18Q8VHR0 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh18Q8VHR0 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh18Q8VHR0 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh18Q8VHR0 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.09□□□□□ -0.47
Pcdh18Q8VHR0 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Pcdh18Q8VHR0 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.09□□□□□ -0.47
Pcdh18Q8VHR0 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh18Q8VHR0 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh18Q8VHR0 Gm6447-201ENSMUST00000118905 835 ntBASIC12.09□□□□□ -0.47
Pcdh18Q8VHR0 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh18Q8VHR0 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh18Q8VHR0 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC12.09□□□□□ -0.47
Pcdh18Q8VHR0 Gm7558-201ENSMUST00000193221 1165 ntBASIC12.09□□□□□ -0.47
Pcdh18Q8VHR0 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC12.09□□□□□ -0.47
Pcdh18Q8VHR0 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12.09□□□□□ -0.47
Pcdh18Q8VHR0 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh18Q8VHR0 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh18Q8VHR0 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Pcdh18Q8VHR0 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Pcdh18Q8VHR0 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
Pcdh18Q8VHR0 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh18Q8VHR0 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh18Q8VHR0 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh18Q8VHR0 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh18Q8VHR0 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh18Q8VHR0 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Pcdh18Q8VHR0 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh18Q8VHR0 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh18Q8VHR0 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh18Q8VHR0 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.09□□□□□ -0.47
Pcdh18Q8VHR0 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh18Q8VHR0 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh18Q8VHR0 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh18Q8VHR0 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.09□□□□□ -0.47
Pcdh18Q8VHR0 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Pcdh18Q8VHR0 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh18Q8VHR0 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.09□□□□□ -0.47
Pcdh18Q8VHR0 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.47
Pcdh18Q8VHR0 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Pcdh18Q8VHR0 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Pcdh18Q8VHR0 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Pcdh18Q8VHR0 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh18Q8VHR0 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh18Q8VHR0 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh18Q8VHR0 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh18Q8VHR0 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh18Q8VHR0 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh18Q8VHR0 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh18Q8VHR0 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh18Q8VHR0 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Pcdh18Q8VHR0 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh18Q8VHR0 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.08□□□□□ -0.48
Pcdh18Q8VHR0 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh18Q8VHR0 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh18Q8VHR0 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC12.08□□□□□ -0.48
Pcdh18Q8VHR0 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh18Q8VHR0 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
Pcdh18Q8VHR0 Gm27437-201ENSMUST00000183429 107 ntBASIC12.08□□□□□ -0.48
Pcdh18Q8VHR0 Mir6392-201ENSMUST00000184924 108 ntBASIC12.08□□□□□ -0.48
Pcdh18Q8VHR0 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Pcdh18Q8VHR0 Gm37917-201ENSMUST00000194711 392 ntBASIC12.08□□□□□ -0.48
Pcdh18Q8VHR0 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.08□□□□□ -0.48
Pcdh18Q8VHR0 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh18Q8VHR0 CT025535.1-201ENSMUST00000227172 491 ntBASIC12.08□□□□□ -0.48
Pcdh18Q8VHR0 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh18Q8VHR0 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh18Q8VHR0 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh18Q8VHR0 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh18Q8VHR0 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh18Q8VHR0 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh18Q8VHR0 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh18Q8VHR0 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh18Q8VHR0 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh18Q8VHR0 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh18Q8VHR0 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh18Q8VHR0 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC12.08□□□□□ -0.48
Pcdh18Q8VHR0 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh18Q8VHR0 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.07□□□□□ -0.48
Pcdh18Q8VHR0 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh18Q8VHR0 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh18Q8VHR0 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh18Q8VHR0 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh18Q8VHR0 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh18Q8VHR0 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh18Q8VHR0 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh18Q8VHR0 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC12.07□□□□□ -0.48
Pcdh18Q8VHR0 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Pcdh18Q8VHR0 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh18Q8VHR0 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
Pcdh18Q8VHR0 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh18Q8VHR0 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh18Q8VHR0 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh18Q8VHR0 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh18Q8VHR0 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC12.07□□□□□ -0.48
Pcdh18Q8VHR0 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms