Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Gm44831-201ENSMUST00000208469 2989 ntBASIC12□□□□□ -0.49
Lsm1Q8VC85 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Lsm1Q8VC85 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Lsm1Q8VC85 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lsm1Q8VC85 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lsm1Q8VC85 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lsm1Q8VC85 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Lsm1Q8VC85 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lsm1Q8VC85 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Lsm1Q8VC85 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lsm1Q8VC85 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lsm1Q8VC85 AC156031.2-201ENSMUST00000213107 3310 ntBASIC11.99□□□□□ -0.49
Lsm1Q8VC85 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lsm1Q8VC85 Gm12490-201ENSMUST00000120255 560 ntBASIC11.99□□□□□ -0.49
Lsm1Q8VC85 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC11.99□□□□□ -0.49
Lsm1Q8VC85 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC11.99□□□□□ -0.49
Lsm1Q8VC85 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC11.99□□□□□ -0.49
Lsm1Q8VC85 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC11.99□□□□□ -0.49
Lsm1Q8VC85 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lsm1Q8VC85 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC11.99□□□□□ -0.49
Lsm1Q8VC85 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC11.99□□□□□ -0.49
Lsm1Q8VC85 Gm26927-201ENSMUST00000182385 965 ntBASIC11.99□□□□□ -0.49
Lsm1Q8VC85 Gm27839-201ENSMUST00000184242 106 ntBASIC11.99□□□□□ -0.49
Lsm1Q8VC85 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC11.99□□□□□ -0.49
Lsm1Q8VC85 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
Lsm1Q8VC85 Gm5035-201ENSMUST00000215581 927 ntBASIC11.99□□□□□ -0.49
Lsm1Q8VC85 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lsm1Q8VC85 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Lsm1Q8VC85 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lsm1Q8VC85 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Lsm1Q8VC85 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC11.99□□□□□ -0.49
Lsm1Q8VC85 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
Lsm1Q8VC85 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lsm1Q8VC85 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC11.99□□□□□ -0.49
Lsm1Q8VC85 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Lsm1Q8VC85 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lsm1Q8VC85 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lsm1Q8VC85 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lsm1Q8VC85 Gm8228-201ENSMUST00000189949 2192 ntBASIC11.99□□□□□ -0.49
Lsm1Q8VC85 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lsm1Q8VC85 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Lsm1Q8VC85 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Lsm1Q8VC85 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lsm1Q8VC85 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Lsm1Q8VC85 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Lsm1Q8VC85 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Lsm1Q8VC85 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lsm1Q8VC85 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC11.99□□□□□ -0.49
Lsm1Q8VC85 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Lsm1Q8VC85 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Lsm1Q8VC85 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC11.98□□□□□ -0.49
Lsm1Q8VC85 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lsm1Q8VC85 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC11.98□□□□□ -0.49
Lsm1Q8VC85 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Lsm1Q8VC85 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lsm1Q8VC85 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Lsm1Q8VC85 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lsm1Q8VC85 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Lsm1Q8VC85 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Lsm1Q8VC85 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC11.98□□□□□ -0.49
Lsm1Q8VC85 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lsm1Q8VC85 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Lsm1Q8VC85 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lsm1Q8VC85 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Lsm1Q8VC85 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Lsm1Q8VC85 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Lsm1Q8VC85 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lsm1Q8VC85 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lsm1Q8VC85 Gm24136-201ENSMUST00000083374 165 ntBASIC11.98□□□□□ -0.49
Lsm1Q8VC85 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Lsm1Q8VC85 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lsm1Q8VC85 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lsm1Q8VC85 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Lsm1Q8VC85 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC11.98□□□□□ -0.49
Lsm1Q8VC85 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
Lsm1Q8VC85 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
Lsm1Q8VC85 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lsm1Q8VC85 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lsm1Q8VC85 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lsm1Q8VC85 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lsm1Q8VC85 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lsm1Q8VC85 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lsm1Q8VC85 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Lsm1Q8VC85 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lsm1Q8VC85 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Lsm1Q8VC85 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Lsm1Q8VC85 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lsm1Q8VC85 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Lsm1Q8VC85 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Lsm1Q8VC85 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lsm1Q8VC85 Gm14132-201ENSMUST00000117188 1719 ntBASIC11.97□□□□□ -0.49
Lsm1Q8VC85 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Lsm1Q8VC85 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lsm1Q8VC85 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lsm1Q8VC85 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lsm1Q8VC85 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC11.97□□□□□ -0.49
Lsm1Q8VC85 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lsm1Q8VC85 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lsm1Q8VC85 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lsm1Q8VC85 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms