Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.1□□□□□ -0.47
Rnf8Q8VC56 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Rnf8Q8VC56 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Rnf8Q8VC56 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf8Q8VC56 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf8Q8VC56 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf8Q8VC56 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Rnf8Q8VC56 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf8Q8VC56 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf8Q8VC56 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf8Q8VC56 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf8Q8VC56 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.09□□□□□ -0.47
Rnf8Q8VC56 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf8Q8VC56 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf8Q8VC56 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf8Q8VC56 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf8Q8VC56 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC12.09□□□□□ -0.47
Rnf8Q8VC56 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf8Q8VC56 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf8Q8VC56 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.09□□□□□ -0.47
Rnf8Q8VC56 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Rnf8Q8VC56 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC12.09□□□□□ -0.47
Rnf8Q8VC56 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.09□□□□□ -0.47
Rnf8Q8VC56 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf8Q8VC56 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf8Q8VC56 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Rnf8Q8VC56 Gm14127-201ENSMUST00000117906 678 ntBASIC12.09□□□□□ -0.47
Rnf8Q8VC56 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf8Q8VC56 Gm22331-201ENSMUST00000158066 136 ntBASIC12.09□□□□□ -0.47
Rnf8Q8VC56 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf8Q8VC56 Gm43818-201ENSMUST00000200605 466 ntBASIC12.09□□□□□ -0.47
Rnf8Q8VC56 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
Rnf8Q8VC56 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.09□□□□□ -0.47
Rnf8Q8VC56 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Rnf8Q8VC56 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf8Q8VC56 Gm25857-201ENSMUST00000082788 129 ntBASIC12.09□□□□□ -0.47
Rnf8Q8VC56 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf8Q8VC56 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf8Q8VC56 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Rnf8Q8VC56 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.09□□□□□ -0.47
Rnf8Q8VC56 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf8Q8VC56 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf8Q8VC56 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf8Q8VC56 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf8Q8VC56 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.09□□□□□ -0.47
Rnf8Q8VC56 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Rnf8Q8VC56 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf8Q8VC56 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf8Q8VC56 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC12.08□□□□□ -0.47
Rnf8Q8VC56 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Rnf8Q8VC56 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Rnf8Q8VC56 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Rnf8Q8VC56 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Rnf8Q8VC56 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Rnf8Q8VC56 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.47
Rnf8Q8VC56 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Rnf8Q8VC56 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf8Q8VC56 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC12.08□□□□□ -0.48
Rnf8Q8VC56 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf8Q8VC56 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf8Q8VC56 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Rnf8Q8VC56 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf8Q8VC56 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.08□□□□□ -0.48
Rnf8Q8VC56 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf8Q8VC56 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf8Q8VC56 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.08□□□□□ -0.48
Rnf8Q8VC56 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf8Q8VC56 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf8Q8VC56 Gm44806-201ENSMUST00000205574 2303 ntBASIC12.08□□□□□ -0.48
Rnf8Q8VC56 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf8Q8VC56 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf8Q8VC56 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf8Q8VC56 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf8Q8VC56 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC12.08□□□□□ -0.48
Rnf8Q8VC56 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.08□□□□□ -0.48
Rnf8Q8VC56 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.08□□□□□ -0.48
Rnf8Q8VC56 Gm4271-201ENSMUST00000174444 973 ntBASIC12.08□□□□□ -0.48
Rnf8Q8VC56 Gm45784-201ENSMUST00000188360 142 ntBASIC12.08□□□□□ -0.48
Rnf8Q8VC56 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.08□□□□□ -0.48
Rnf8Q8VC56 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf8Q8VC56 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf8Q8VC56 Cdk7-205ENSMUST00000225990 1159 ntBASIC12.08□□□□□ -0.48
Rnf8Q8VC56 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf8Q8VC56 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf8Q8VC56 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf8Q8VC56 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf8Q8VC56 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf8Q8VC56 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf8Q8VC56 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf8Q8VC56 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Rnf8Q8VC56 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf8Q8VC56 Gm15222-202ENSMUST00000228667 1726 ntBASIC12.08□□□□□ -0.48
Rnf8Q8VC56 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf8Q8VC56 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf8Q8VC56 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf8Q8VC56 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf8Q8VC56 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Rnf8Q8VC56 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf8Q8VC56 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.08□□□□□ -0.48
Rnf8Q8VC56 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms