Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ushbp1Q8R370 Gm37269-201ENSMUST00000193906 1891 ntBASIC14.01□□□□□ -0.17
Ushbp1Q8R370 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ushbp1Q8R370 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ushbp1Q8R370 AC117194.1-201ENSMUST00000224847 3002 ntBASIC14.01□□□□□ -0.17
Ushbp1Q8R370 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ushbp1Q8R370 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ushbp1Q8R370 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ushbp1Q8R370 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ushbp1Q8R370 Gm43289-201ENSMUST00000200537 1475 ntBASIC14.01□□□□□ -0.17
Ushbp1Q8R370 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ushbp1Q8R370 Gm20554-201ENSMUST00000177421 2352 ntBASIC14.01□□□□□ -0.17
Ushbp1Q8R370 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC14.01□□□□□ -0.17
Ushbp1Q8R370 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC14.01□□□□□ -0.17
Ushbp1Q8R370 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ushbp1Q8R370 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ushbp1Q8R370 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ushbp1Q8R370 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Ushbp1Q8R370 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ushbp1Q8R370 Gm2420-201ENSMUST00000119864 2149 ntBASIC14.01□□□□□ -0.17
Ushbp1Q8R370 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ushbp1Q8R370 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC14.01□□□□□ -0.17
Ushbp1Q8R370 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC14.01□□□□□ -0.17
Ushbp1Q8R370 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ushbp1Q8R370 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC14.01□□□□□ -0.17
Ushbp1Q8R370 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Ushbp1Q8R370 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC14.01□□□□□ -0.17
Ushbp1Q8R370 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC14.01□□□□□ -0.17
Ushbp1Q8R370 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC14.01□□□□□ -0.17
Ushbp1Q8R370 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ushbp1Q8R370 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC14.01□□□□□ -0.17
Ushbp1Q8R370 Morn2-202ENSMUST00000227729 656 ntBASIC14.01□□□□□ -0.17
Ushbp1Q8R370 CT025533.2-201ENSMUST00000228715 1248 ntBASIC14.01□□□□□ -0.17
Ushbp1Q8R370 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Ushbp1Q8R370 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ushbp1Q8R370 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC14.01□□□□□ -0.17
Ushbp1Q8R370 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC14.01□□□□□ -0.17
Ushbp1Q8R370 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Ushbp1Q8R370 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ushbp1Q8R370 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Ushbp1Q8R370 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ushbp1Q8R370 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ushbp1Q8R370 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ushbp1Q8R370 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Ushbp1Q8R370 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Ushbp1Q8R370 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Ushbp1Q8R370 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC14□□□□□ -0.17
Ushbp1Q8R370 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC14□□□□□ -0.17
Ushbp1Q8R370 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC14□□□□□ -0.17
Ushbp1Q8R370 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Ushbp1Q8R370 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC14□□□□□ -0.17
Ushbp1Q8R370 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ushbp1Q8R370 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Ushbp1Q8R370 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Ushbp1Q8R370 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ushbp1Q8R370 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ushbp1Q8R370 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ushbp1Q8R370 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ushbp1Q8R370 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC14□□□□□ -0.17
Ushbp1Q8R370 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC14□□□□□ -0.17
Ushbp1Q8R370 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ushbp1Q8R370 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC14□□□□□ -0.17
Ushbp1Q8R370 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC14□□□□□ -0.17
Ushbp1Q8R370 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC14□□□□□ -0.17
Ushbp1Q8R370 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ushbp1Q8R370 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC14□□□□□ -0.17
Ushbp1Q8R370 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ushbp1Q8R370 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ushbp1Q8R370 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ushbp1Q8R370 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ushbp1Q8R370 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Ushbp1Q8R370 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Ushbp1Q8R370 Gm44241-201ENSMUST00000203230 1662 ntBASIC14□□□□□ -0.17
Ushbp1Q8R370 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Ushbp1Q8R370 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC14□□□□□ -0.17
Ushbp1Q8R370 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ushbp1Q8R370 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ushbp1Q8R370 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Ushbp1Q8R370 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Ushbp1Q8R370 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ushbp1Q8R370 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ushbp1Q8R370 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ushbp1Q8R370 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ushbp1Q8R370 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC13.99□□□□□ -0.17
Ushbp1Q8R370 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ushbp1Q8R370 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ushbp1Q8R370 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ushbp1Q8R370 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ushbp1Q8R370 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC13.99□□□□□ -0.17
Ushbp1Q8R370 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ushbp1Q8R370 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ushbp1Q8R370 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ushbp1Q8R370 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ushbp1Q8R370 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ushbp1Q8R370 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ushbp1Q8R370 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
Ushbp1Q8R370 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC13.99□□□□□ -0.17
Ushbp1Q8R370 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Ushbp1Q8R370 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC13.99□□□□□ -0.17
Ushbp1Q8R370 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 73.1 ms