Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC12.35□□□□□ -0.43
Ccdc28bQ8CEG5 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Ccdc28bQ8CEG5 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc28bQ8CEG5 Gm43575-201ENSMUST00000196420 516 ntBASIC12.35□□□□□ -0.43
Ccdc28bQ8CEG5 Gm6983-201ENSMUST00000214912 628 ntBASIC12.35□□□□□ -0.43
Ccdc28bQ8CEG5 AC132863.2-201ENSMUST00000226643 799 ntBASIC12.35□□□□□ -0.43
Ccdc28bQ8CEG5 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC12.35□□□□□ -0.43
Ccdc28bQ8CEG5 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc28bQ8CEG5 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.35□□□□□ -0.43
Ccdc28bQ8CEG5 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc28bQ8CEG5 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc28bQ8CEG5 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC12.35□□□□□ -0.43
Ccdc28bQ8CEG5 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Ccdc28bQ8CEG5 Gm15544-201ENSMUST00000118776 1531 ntBASIC12.35□□□□□ -0.43
Ccdc28bQ8CEG5 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc28bQ8CEG5 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc28bQ8CEG5 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc28bQ8CEG5 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc28bQ8CEG5 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc28bQ8CEG5 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc28bQ8CEG5 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc28bQ8CEG5 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Ccdc28bQ8CEG5 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc28bQ8CEG5 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC12.35□□□□□ -0.43
Ccdc28bQ8CEG5 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc28bQ8CEG5 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc28bQ8CEG5 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc28bQ8CEG5 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC12.34□□□□□ -0.43
Ccdc28bQ8CEG5 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc28bQ8CEG5 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc28bQ8CEG5 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc28bQ8CEG5 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Ccdc28bQ8CEG5 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc28bQ8CEG5 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12.34□□□□□ -0.43
Ccdc28bQ8CEG5 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.34□□□□□ -0.43
Ccdc28bQ8CEG5 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Ccdc28bQ8CEG5 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc28bQ8CEG5 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc28bQ8CEG5 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc28bQ8CEG5 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc28bQ8CEG5 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Ccdc28bQ8CEG5 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc28bQ8CEG5 AC122811.1-201ENSMUST00000222257 2921 ntBASIC12.34□□□□□ -0.43
Ccdc28bQ8CEG5 Gm13394-201ENSMUST00000121658 1000 ntBASIC12.34□□□□□ -0.43
Ccdc28bQ8CEG5 Gm14760-201ENSMUST00000121831 999 ntBASIC12.34□□□□□ -0.43
Ccdc28bQ8CEG5 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc28bQ8CEG5 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Ccdc28bQ8CEG5 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc28bQ8CEG5 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc28bQ8CEG5 Mir7684-201ENSMUST00000183858 60 ntBASIC12.34□□□□□ -0.43
Ccdc28bQ8CEG5 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Ccdc28bQ8CEG5 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC12.34□□□□□ -0.43
Ccdc28bQ8CEG5 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Ccdc28bQ8CEG5 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.34□□□□□ -0.43
Ccdc28bQ8CEG5 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC12.34□□□□□ -0.43
Ccdc28bQ8CEG5 Gm7730-201ENSMUST00000212486 454 ntBASIC12.34□□□□□ -0.43
Ccdc28bQ8CEG5 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
Ccdc28bQ8CEG5 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.34□□□□□ -0.43
Ccdc28bQ8CEG5 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
Ccdc28bQ8CEG5 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc28bQ8CEG5 Gm16372-201ENSMUST00000073088 450 ntBASIC12.34□□□□□ -0.43
Ccdc28bQ8CEG5 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc28bQ8CEG5 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc28bQ8CEG5 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Ccdc28bQ8CEG5 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc28bQ8CEG5 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc28bQ8CEG5 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc28bQ8CEG5 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Ccdc28bQ8CEG5 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc28bQ8CEG5 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Ccdc28bQ8CEG5 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc28bQ8CEG5 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc28bQ8CEG5 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc28bQ8CEG5 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc28bQ8CEG5 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC12.34□□□□□ -0.43
Ccdc28bQ8CEG5 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Ccdc28bQ8CEG5 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Ccdc28bQ8CEG5 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc28bQ8CEG5 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Ccdc28bQ8CEG5 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc28bQ8CEG5 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc28bQ8CEG5 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.34□□□□□ -0.43
Ccdc28bQ8CEG5 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc28bQ8CEG5 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc28bQ8CEG5 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Ccdc28bQ8CEG5 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.34□□□□□ -0.43
Ccdc28bQ8CEG5 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Ccdc28bQ8CEG5 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Ccdc28bQ8CEG5 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Ccdc28bQ8CEG5 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.43
Ccdc28bQ8CEG5 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Ccdc28bQ8CEG5 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Ccdc28bQ8CEG5 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc28bQ8CEG5 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.33□□□□□ -0.44
Ccdc28bQ8CEG5 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Ccdc28bQ8CEG5 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc28bQ8CEG5 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc28bQ8CEG5 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc28bQ8CEG5 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc28bQ8CEG5 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms