Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim52Q8CDV4 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim52Q8CDV4 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim52Q8CDV4 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim52Q8CDV4 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Trim52Q8CDV4 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trim52Q8CDV4 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim52Q8CDV4 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC15.34■□□□□ 0.05
Trim52Q8CDV4 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim52Q8CDV4 Gm37861-201ENSMUST00000193534 2869 ntBASIC15.34■□□□□ 0.05
Trim52Q8CDV4 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.05
Trim52Q8CDV4 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trim52Q8CDV4 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trim52Q8CDV4 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC15.33■□□□□ 0.04
Trim52Q8CDV4 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim52Q8CDV4 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC15.33■□□□□ 0.04
Trim52Q8CDV4 Cd63-ps-202ENSMUST00000154992 717 ntBASIC15.33■□□□□ 0.04
Trim52Q8CDV4 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Trim52Q8CDV4 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
Trim52Q8CDV4 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC15.33■□□□□ 0.04
Trim52Q8CDV4 Gm9630-201ENSMUST00000178304 885 ntBASIC15.33■□□□□ 0.04
Trim52Q8CDV4 Gm5733-201ENSMUST00000190232 939 ntBASIC15.33■□□□□ 0.04
Trim52Q8CDV4 Gm4157-201ENSMUST00000211647 679 ntBASIC15.33■□□□□ 0.04
Trim52Q8CDV4 CT009713.8-201ENSMUST00000225448 560 ntBASIC15.33■□□□□ 0.04
Trim52Q8CDV4 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim52Q8CDV4 Ntng1-201ENSMUST00000051253 327 ntBASIC15.33■□□□□ 0.04
Trim52Q8CDV4 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim52Q8CDV4 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Trim52Q8CDV4 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim52Q8CDV4 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim52Q8CDV4 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC15.33■□□□□ 0.04
Trim52Q8CDV4 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trim52Q8CDV4 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim52Q8CDV4 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trim52Q8CDV4 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim52Q8CDV4 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim52Q8CDV4 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim52Q8CDV4 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim52Q8CDV4 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim52Q8CDV4 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim52Q8CDV4 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim52Q8CDV4 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim52Q8CDV4 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim52Q8CDV4 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Trim52Q8CDV4 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim52Q8CDV4 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Trim52Q8CDV4 Gm12165-201ENSMUST00000117047 342 ntBASIC15.32■□□□□ 0.04
Trim52Q8CDV4 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trim52Q8CDV4 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC15.32■□□□□ 0.04
Trim52Q8CDV4 CT009718.3-201ENSMUST00000221116 367 ntBASIC15.32■□□□□ 0.04
Trim52Q8CDV4 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim52Q8CDV4 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Trim52Q8CDV4 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim52Q8CDV4 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Trim52Q8CDV4 Gm44260-201ENSMUST00000204946 2094 ntBASIC15.32■□□□□ 0.04
Trim52Q8CDV4 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim52Q8CDV4 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim52Q8CDV4 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim52Q8CDV4 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim52Q8CDV4 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim52Q8CDV4 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Trim52Q8CDV4 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim52Q8CDV4 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Trim52Q8CDV4 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC15.31■□□□□ 0.04
Trim52Q8CDV4 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trim52Q8CDV4 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trim52Q8CDV4 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim52Q8CDV4 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Trim52Q8CDV4 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Trim52Q8CDV4 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Trim52Q8CDV4 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
Trim52Q8CDV4 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim52Q8CDV4 Gm43677-201ENSMUST00000198098 2378 ntBASIC15.31■□□□□ 0.04
Trim52Q8CDV4 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim52Q8CDV4 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Trim52Q8CDV4 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim52Q8CDV4 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim52Q8CDV4 Gm14724-201ENSMUST00000118400 537 ntBASIC15.31■□□□□ 0.04
Trim52Q8CDV4 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim52Q8CDV4 Gm42682-201ENSMUST00000198349 1265 ntBASIC15.31■□□□□ 0.04
Trim52Q8CDV4 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trim52Q8CDV4 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC15.31■□□□□ 0.04
Trim52Q8CDV4 AC159819.2-201ENSMUST00000216151 342 ntBASIC15.31■□□□□ 0.04
Trim52Q8CDV4 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim52Q8CDV4 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC15.31■□□□□ 0.04
Trim52Q8CDV4 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim52Q8CDV4 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC15.31■□□□□ 0.04
Trim52Q8CDV4 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim52Q8CDV4 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim52Q8CDV4 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC15.31■□□□□ 0.04
Trim52Q8CDV4 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Trim52Q8CDV4 Gm9072-201ENSMUST00000218390 1514 ntBASIC15.31■□□□□ 0.04
Trim52Q8CDV4 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim52Q8CDV4 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim52Q8CDV4 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trim52Q8CDV4 Ssr1-203ENSMUST00000225246 1825 ntBASIC15.31■□□□□ 0.04
Trim52Q8CDV4 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Trim52Q8CDV4 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC15.31■□□□□ 0.04
Trim52Q8CDV4 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim52Q8CDV4 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms