Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc38Q8CDN8 Daam2-202ENSMUST00000224595 1926 ntBASIC13.92□□□□□ -0.18
Ccdc38Q8CDN8 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc38Q8CDN8 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC13.92□□□□□ -0.18
Ccdc38Q8CDN8 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc38Q8CDN8 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc38Q8CDN8 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc38Q8CDN8 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC13.91□□□□□ -0.18
Ccdc38Q8CDN8 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc38Q8CDN8 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Ccdc38Q8CDN8 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC13.91□□□□□ -0.18
Ccdc38Q8CDN8 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc38Q8CDN8 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc38Q8CDN8 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc38Q8CDN8 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc38Q8CDN8 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc38Q8CDN8 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc38Q8CDN8 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc38Q8CDN8 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC13.91□□□□□ -0.18
Ccdc38Q8CDN8 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC13.91□□□□□ -0.18
Ccdc38Q8CDN8 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC13.91□□□□□ -0.18
Ccdc38Q8CDN8 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Ccdc38Q8CDN8 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC13.91□□□□□ -0.18
Ccdc38Q8CDN8 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC13.91□□□□□ -0.18
Ccdc38Q8CDN8 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc38Q8CDN8 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc38Q8CDN8 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc38Q8CDN8 Gm43823-201ENSMUST00000197391 1808 ntBASIC13.91□□□□□ -0.18
Ccdc38Q8CDN8 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc38Q8CDN8 Nupl1-206ENSMUST00000225111 2936 ntBASIC13.91□□□□□ -0.18
Ccdc38Q8CDN8 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc38Q8CDN8 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc38Q8CDN8 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc38Q8CDN8 Gm8706-201ENSMUST00000197372 1491 ntBASIC13.91□□□□□ -0.18
Ccdc38Q8CDN8 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc38Q8CDN8 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc38Q8CDN8 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc38Q8CDN8 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc38Q8CDN8 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc38Q8CDN8 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Ccdc38Q8CDN8 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc38Q8CDN8 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Ccdc38Q8CDN8 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc38Q8CDN8 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc38Q8CDN8 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc38Q8CDN8 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc38Q8CDN8 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc38Q8CDN8 Gm43860-201ENSMUST00000201742 2705 ntBASIC13.9□□□□□ -0.18
Ccdc38Q8CDN8 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc38Q8CDN8 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC13.9□□□□□ -0.18
Ccdc38Q8CDN8 Gm1335-201ENSMUST00000121653 386 ntBASIC13.9□□□□□ -0.18
Ccdc38Q8CDN8 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Ccdc38Q8CDN8 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc38Q8CDN8 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc38Q8CDN8 Gm27390-201ENSMUST00000184516 176 ntBASIC13.9□□□□□ -0.18
Ccdc38Q8CDN8 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc38Q8CDN8 Arhgef33-209ENSMUST00000225223 714 ntBASIC13.9□□□□□ -0.18
Ccdc38Q8CDN8 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc38Q8CDN8 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc38Q8CDN8 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc38Q8CDN8 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc38Q8CDN8 Gm10339-203ENSMUST00000225409 1671 ntBASIC13.9□□□□□ -0.18
Ccdc38Q8CDN8 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc38Q8CDN8 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc38Q8CDN8 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc38Q8CDN8 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc38Q8CDN8 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc38Q8CDN8 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc38Q8CDN8 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.19
Ccdc38Q8CDN8 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC13.89□□□□□ -0.19
Ccdc38Q8CDN8 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc38Q8CDN8 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc38Q8CDN8 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc38Q8CDN8 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
Ccdc38Q8CDN8 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc38Q8CDN8 AC122840.1-201ENSMUST00000220915 3334 ntBASIC13.89□□□□□ -0.19
Ccdc38Q8CDN8 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc38Q8CDN8 AC123738.2-201ENSMUST00000223791 1899 ntBASIC13.89□□□□□ -0.19
Ccdc38Q8CDN8 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc38Q8CDN8 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc38Q8CDN8 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc38Q8CDN8 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc38Q8CDN8 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc38Q8CDN8 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc38Q8CDN8 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc38Q8CDN8 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc38Q8CDN8 Gm13492-201ENSMUST00000119772 665 ntBASIC13.89□□□□□ -0.19
Ccdc38Q8CDN8 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC13.89□□□□□ -0.19
Ccdc38Q8CDN8 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Ccdc38Q8CDN8 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC13.89□□□□□ -0.19
Ccdc38Q8CDN8 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Ccdc38Q8CDN8 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc38Q8CDN8 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc38Q8CDN8 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc38Q8CDN8 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Ccdc38Q8CDN8 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Ccdc38Q8CDN8 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc38Q8CDN8 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc38Q8CDN8 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc38Q8CDN8 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms