Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col6a6Q8C6K9 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Col6a6Q8C6K9 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col6a6Q8C6K9 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col6a6Q8C6K9 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col6a6Q8C6K9 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col6a6Q8C6K9 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col6a6Q8C6K9 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col6a6Q8C6K9 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col6a6Q8C6K9 Grk6-205ENSMUST00000224653 2976 ntBASIC11.26□□□□□ -0.61
Col6a6Q8C6K9 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col6a6Q8C6K9 Gm21998-201ENSMUST00000117552 1308 ntBASIC11.26□□□□□ -0.61
Col6a6Q8C6K9 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col6a6Q8C6K9 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Col6a6Q8C6K9 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col6a6Q8C6K9 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col6a6Q8C6K9 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col6a6Q8C6K9 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Col6a6Q8C6K9 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC11.25□□□□□ -0.61
Col6a6Q8C6K9 Gm22138-201ENSMUST00000158748 128 ntBASIC11.25□□□□□ -0.61
Col6a6Q8C6K9 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Col6a6Q8C6K9 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Col6a6Q8C6K9 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC11.25□□□□□ -0.61
Col6a6Q8C6K9 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC11.25□□□□□ -0.61
Col6a6Q8C6K9 AC171241.1-201ENSMUST00000228144 1166 ntBASIC11.25□□□□□ -0.61
Col6a6Q8C6K9 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Col6a6Q8C6K9 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col6a6Q8C6K9 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Col6a6Q8C6K9 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Col6a6Q8C6K9 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC11.25□□□□□ -0.61
Col6a6Q8C6K9 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col6a6Q8C6K9 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col6a6Q8C6K9 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC11.25□□□□□ -0.61
Col6a6Q8C6K9 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col6a6Q8C6K9 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col6a6Q8C6K9 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
Col6a6Q8C6K9 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Col6a6Q8C6K9 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col6a6Q8C6K9 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col6a6Q8C6K9 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col6a6Q8C6K9 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col6a6Q8C6K9 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col6a6Q8C6K9 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col6a6Q8C6K9 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Col6a6Q8C6K9 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Col6a6Q8C6K9 Cd63-ps-202ENSMUST00000154992 717 ntBASIC11.25□□□□□ -0.61
Col6a6Q8C6K9 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC11.25□□□□□ -0.61
Col6a6Q8C6K9 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col6a6Q8C6K9 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC11.25□□□□□ -0.61
Col6a6Q8C6K9 Gm17831-201ENSMUST00000205579 900 ntBASIC11.25□□□□□ -0.61
Col6a6Q8C6K9 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col6a6Q8C6K9 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col6a6Q8C6K9 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col6a6Q8C6K9 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Col6a6Q8C6K9 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col6a6Q8C6K9 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col6a6Q8C6K9 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col6a6Q8C6K9 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col6a6Q8C6K9 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col6a6Q8C6K9 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col6a6Q8C6K9 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Col6a6Q8C6K9 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Col6a6Q8C6K9 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Col6a6Q8C6K9 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Col6a6Q8C6K9 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col6a6Q8C6K9 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Col6a6Q8C6K9 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Col6a6Q8C6K9 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col6a6Q8C6K9 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Col6a6Q8C6K9 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col6a6Q8C6K9 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Col6a6Q8C6K9 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col6a6Q8C6K9 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Col6a6Q8C6K9 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col6a6Q8C6K9 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Col6a6Q8C6K9 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col6a6Q8C6K9 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Col6a6Q8C6K9 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col6a6Q8C6K9 Gm14058-201ENSMUST00000116082 735 ntBASIC11.24□□□□□ -0.61
Col6a6Q8C6K9 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC11.24□□□□□ -0.61
Col6a6Q8C6K9 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Col6a6Q8C6K9 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col6a6Q8C6K9 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC11.24□□□□□ -0.61
Col6a6Q8C6K9 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC11.24□□□□□ -0.61
Col6a6Q8C6K9 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Col6a6Q8C6K9 AC124457.1-201ENSMUST00000198845 120 ntBASIC11.24□□□□□ -0.61
Col6a6Q8C6K9 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC11.24□□□□□ -0.61
Col6a6Q8C6K9 Gm2517-201ENSMUST00000215651 348 ntBASIC11.24□□□□□ -0.61
Col6a6Q8C6K9 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Col6a6Q8C6K9 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Col6a6Q8C6K9 AC132901.1-201ENSMUST00000224345 508 ntBASIC11.24□□□□□ -0.61
Col6a6Q8C6K9 AC165260.3-202ENSMUST00000224550 1031 ntBASIC11.24□□□□□ -0.61
Col6a6Q8C6K9 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col6a6Q8C6K9 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col6a6Q8C6K9 Ginm1-202ENSMUST00000065124 300 ntBASIC11.24□□□□□ -0.61
Col6a6Q8C6K9 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Col6a6Q8C6K9 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col6a6Q8C6K9 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col6a6Q8C6K9 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col6a6Q8C6K9 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms