Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rd3Q8BRE0 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rd3Q8BRE0 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Rd3Q8BRE0 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rd3Q8BRE0 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC13.25□□□□□ -0.29
Rd3Q8BRE0 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rd3Q8BRE0 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rd3Q8BRE0 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rd3Q8BRE0 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rd3Q8BRE0 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rd3Q8BRE0 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rd3Q8BRE0 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Rd3Q8BRE0 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Rd3Q8BRE0 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rd3Q8BRE0 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rd3Q8BRE0 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Rd3Q8BRE0 Gm8617-201ENSMUST00000118796 2222 ntBASIC13.24□□□□□ -0.29
Rd3Q8BRE0 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rd3Q8BRE0 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Rd3Q8BRE0 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Rd3Q8BRE0 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rd3Q8BRE0 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rd3Q8BRE0 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rd3Q8BRE0 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rd3Q8BRE0 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Rd3Q8BRE0 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rd3Q8BRE0 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Rd3Q8BRE0 Gm12266-201ENSMUST00000120311 962 ntBASIC13.24□□□□□ -0.29
Rd3Q8BRE0 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rd3Q8BRE0 Gm13394-201ENSMUST00000121658 1000 ntBASIC13.24□□□□□ -0.29
Rd3Q8BRE0 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Rd3Q8BRE0 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC13.24□□□□□ -0.29
Rd3Q8BRE0 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC13.24□□□□□ -0.29
Rd3Q8BRE0 Gm27627-201ENSMUST00000183644 150 ntBASIC13.24□□□□□ -0.29
Rd3Q8BRE0 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC13.24□□□□□ -0.29
Rd3Q8BRE0 Gm44100-201ENSMUST00000204329 436 ntBASIC13.24□□□□□ -0.29
Rd3Q8BRE0 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC13.24□□□□□ -0.29
Rd3Q8BRE0 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rd3Q8BRE0 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Rd3Q8BRE0 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Rd3Q8BRE0 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rd3Q8BRE0 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Rd3Q8BRE0 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rd3Q8BRE0 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Rd3Q8BRE0 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rd3Q8BRE0 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Rd3Q8BRE0 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rd3Q8BRE0 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC13.24□□□□□ -0.29
Rd3Q8BRE0 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rd3Q8BRE0 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Rd3Q8BRE0 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rd3Q8BRE0 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rd3Q8BRE0 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rd3Q8BRE0 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rd3Q8BRE0 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rd3Q8BRE0 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rd3Q8BRE0 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Rd3Q8BRE0 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rd3Q8BRE0 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rd3Q8BRE0 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC13.23□□□□□ -0.29
Rd3Q8BRE0 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Rd3Q8BRE0 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rd3Q8BRE0 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Rd3Q8BRE0 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rd3Q8BRE0 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rd3Q8BRE0 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rd3Q8BRE0 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rd3Q8BRE0 Gm13611-201ENSMUST00000118269 318 ntBASIC13.23□□□□□ -0.29
Rd3Q8BRE0 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC13.23□□□□□ -0.29
Rd3Q8BRE0 Gm17040-202ENSMUST00000170597 889 ntBASIC13.23□□□□□ -0.29
Rd3Q8BRE0 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC13.23□□□□□ -0.29
Rd3Q8BRE0 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC13.23□□□□□ -0.29
Rd3Q8BRE0 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Rd3Q8BRE0 AC107638.1-201ENSMUST00000213690 1061 ntBASIC13.23□□□□□ -0.29
Rd3Q8BRE0 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Rd3Q8BRE0 AC138604.1-201ENSMUST00000226969 739 ntBASIC13.23□□□□□ -0.29
Rd3Q8BRE0 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rd3Q8BRE0 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rd3Q8BRE0 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rd3Q8BRE0 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Rd3Q8BRE0 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Rd3Q8BRE0 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rd3Q8BRE0 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Rd3Q8BRE0 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rd3Q8BRE0 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Rd3Q8BRE0 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC13.23□□□□□ -0.29
Rd3Q8BRE0 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Rd3Q8BRE0 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rd3Q8BRE0 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Rd3Q8BRE0 Gm5884-201ENSMUST00000036712 1479 ntBASIC13.23□□□□□ -0.29
Rd3Q8BRE0 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rd3Q8BRE0 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Rd3Q8BRE0 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rd3Q8BRE0 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rd3Q8BRE0 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rd3Q8BRE0 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rd3Q8BRE0 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rd3Q8BRE0 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rd3Q8BRE0 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rd3Q8BRE0 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 88.7 ms