Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC10.28□□□□□ -0.76
Smg1Q8BKX6 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Smg1Q8BKX6 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC10.28□□□□□ -0.76
Smg1Q8BKX6 Rpl7a-201ENSMUST00000102898 914 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smg1Q8BKX6 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Smg1Q8BKX6 Gm15524-201ENSMUST00000159874 463 ntTSL 3 BASIC10.28□□□□□ -0.76
Smg1Q8BKX6 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC10.28□□□□□ -0.76
Smg1Q8BKX6 Gm20703-201ENSMUST00000175668 385 ntTSL 2 BASIC10.28□□□□□ -0.76
Smg1Q8BKX6 Gm18776-201ENSMUST00000188833 654 ntBASIC10.28□□□□□ -0.76
Smg1Q8BKX6 Gm29808-201ENSMUST00000194419 468 ntBASIC10.28□□□□□ -0.76
Smg1Q8BKX6 Gm40910-202ENSMUST00000223077 569 ntTSL 5 BASIC10.28□□□□□ -0.76
Smg1Q8BKX6 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smg1Q8BKX6 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
Smg1Q8BKX6 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smg1Q8BKX6 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC10.28□□□□□ -0.76
Smg1Q8BKX6 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smg1Q8BKX6 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smg1Q8BKX6 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smg1Q8BKX6 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Smg1Q8BKX6 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Smg1Q8BKX6 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Smg1Q8BKX6 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC10.27□□□□□ -0.76
Smg1Q8BKX6 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Smg1Q8BKX6 Gm14193-201ENSMUST00000105067 153 ntBASIC10.27□□□□□ -0.76
Smg1Q8BKX6 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.76
Smg1Q8BKX6 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC10.27□□□□□ -0.76
Smg1Q8BKX6 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC10.27□□□□□ -0.76
Smg1Q8BKX6 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC10.27□□□□□ -0.76
Smg1Q8BKX6 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.76
Smg1Q8BKX6 Tex101-201ENSMUST00000078001 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Smg1Q8BKX6 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Smg1Q8BKX6 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Smg1Q8BKX6 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC10.27□□□□□ -0.77
Smg1Q8BKX6 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Smg1Q8BKX6 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Smg1Q8BKX6 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Smg1Q8BKX6 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Smg1Q8BKX6 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Smg1Q8BKX6 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Smg1Q8BKX6 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Smg1Q8BKX6 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Smg1Q8BKX6 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC10.27□□□□□ -0.77
Smg1Q8BKX6 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC10.27□□□□□ -0.77
Smg1Q8BKX6 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC10.27□□□□□ -0.77
Smg1Q8BKX6 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Smg1Q8BKX6 Gm29763-201ENSMUST00000205306 616 ntBASIC10.27□□□□□ -0.77
Smg1Q8BKX6 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC10.27□□□□□ -0.77
Smg1Q8BKX6 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC10.27□□□□□ -0.77
Smg1Q8BKX6 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC10.27□□□□□ -0.77
Smg1Q8BKX6 Gstm2-202ENSMUST00000066530 854 ntTSL 3 BASIC10.27□□□□□ -0.77
Smg1Q8BKX6 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.77
Smg1Q8BKX6 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Smg1Q8BKX6 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Smg1Q8BKX6 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Smg1Q8BKX6 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Smg1Q8BKX6 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Smg1Q8BKX6 Atp5s-204ENSMUST00000220916 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Smg1Q8BKX6 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Smg1Q8BKX6 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC10.27□□□□□ -0.77
Smg1Q8BKX6 Gm28719-201ENSMUST00000187779 1757 ntBASIC10.27□□□□□ -0.77
Smg1Q8BKX6 Gm8038-201ENSMUST00000164674 2044 ntBASIC10.27□□□□□ -0.77
Smg1Q8BKX6 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Smg1Q8BKX6 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Smg1Q8BKX6 Gm4868-201ENSMUST00000164138 789 ntBASIC10.27□□□□□ -0.77
Smg1Q8BKX6 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC10.27□□□□□ -0.77
Smg1Q8BKX6 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Smg1Q8BKX6 Gm24954-201ENSMUST00000178831 110 ntBASIC10.27□□□□□ -0.77
Smg1Q8BKX6 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC10.27□□□□□ -0.77
Smg1Q8BKX6 Nkg7-201ENSMUST00000070518 881 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Smg1Q8BKX6 Gm23680-201ENSMUST00000083162 164 ntBASIC10.27□□□□□ -0.77
Smg1Q8BKX6 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Smg1Q8BKX6 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Smg1Q8BKX6 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Smg1Q8BKX6 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Smg1Q8BKX6 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Smg1Q8BKX6 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Smg1Q8BKX6 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Smg1Q8BKX6 Trav10d-201ENSMUST00000103646 406 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Smg1Q8BKX6 Gm5863-201ENSMUST00000121760 1008 ntBASIC10.26□□□□□ -0.77
Smg1Q8BKX6 Gm14222-201ENSMUST00000128681 575 ntTSL 2 BASIC10.26□□□□□ -0.77
Smg1Q8BKX6 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Smg1Q8BKX6 Gm24943-201ENSMUST00000158329 433 ntBASIC10.26□□□□□ -0.77
Smg1Q8BKX6 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC10.26□□□□□ -0.77
Smg1Q8BKX6 Gm29304-201ENSMUST00000186555 695 ntBASIC10.26□□□□□ -0.77
Smg1Q8BKX6 Gm29223-201ENSMUST00000188867 695 ntBASIC10.26□□□□□ -0.77
Smg1Q8BKX6 Gm37921-201ENSMUST00000194333 695 ntBASIC10.26□□□□□ -0.77
Smg1Q8BKX6 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Smg1Q8BKX6 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Smg1Q8BKX6 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Smg1Q8BKX6 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Smg1Q8BKX6 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Smg1Q8BKX6 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Smg1Q8BKX6 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Smg1Q8BKX6 Mrps23-201ENSMUST00000024486 1332 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Smg1Q8BKX6 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC10.26□□□□□ -0.77
Smg1Q8BKX6 Gm22442-201ENSMUST00000157256 144 ntBASIC10.26□□□□□ -0.77
Smg1Q8BKX6 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC10.26□□□□□ -0.77
Smg1Q8BKX6 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC10.26□□□□□ -0.77
Smg1Q8BKX6 Gm43184-201ENSMUST00000197247 542 ntBASIC10.26□□□□□ -0.77
Smg1Q8BKX6 Gm18123-201ENSMUST00000210874 822 ntBASIC10.26□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms