Protein–RNA interactions for Protein: Q8BKA3

Srrm4, Serine/arginine repetitive matrix protein 4, mousemouse

Predictions only

Length 608 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm4Q8BKA3 Gm13492-201ENSMUST00000119772 665 ntBASIC10.85□□□□□ -0.67
Srrm4Q8BKA3 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC10.85□□□□□ -0.67
Srrm4Q8BKA3 Gm13316-201ENSMUST00000140537 691 ntBASIC10.85□□□□□ -0.67
Srrm4Q8BKA3 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Srrm4Q8BKA3 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Srrm4Q8BKA3 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC10.85□□□□□ -0.67
Srrm4Q8BKA3 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Srrm4Q8BKA3 Mospd4-201ENSMUST00000180618 576 ntBASIC10.85□□□□□ -0.67
Srrm4Q8BKA3 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
Srrm4Q8BKA3 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC10.85□□□□□ -0.67
Srrm4Q8BKA3 Gm18935-201ENSMUST00000212692 664 ntBASIC10.85□□□□□ -0.67
Srrm4Q8BKA3 Gm10608-202ENSMUST00000213924 676 ntBASIC10.85□□□□□ -0.67
Srrm4Q8BKA3 AC154305.4-201ENSMUST00000224520 614 ntBASIC10.85□□□□□ -0.67
Srrm4Q8BKA3 AC132317.1-201ENSMUST00000227227 962 ntBASIC10.85□□□□□ -0.67
Srrm4Q8BKA3 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
Srrm4Q8BKA3 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Srrm4Q8BKA3 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Srrm4Q8BKA3 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Srrm4Q8BKA3 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Srrm4Q8BKA3 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Srrm4Q8BKA3 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Srrm4Q8BKA3 Gm18222-201ENSMUST00000202416 1387 ntBASIC10.85□□□□□ -0.67
Srrm4Q8BKA3 Daam2-202ENSMUST00000224595 1926 ntBASIC10.85□□□□□ -0.67
Srrm4Q8BKA3 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Srrm4Q8BKA3 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Srrm4Q8BKA3 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Srrm4Q8BKA3 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Srrm4Q8BKA3 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Srrm4Q8BKA3 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Srrm4Q8BKA3 Gm1995-201ENSMUST00000220838 2602 ntBASIC10.85□□□□□ -0.67
Srrm4Q8BKA3 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Srrm4Q8BKA3 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC10.85□□□□□ -0.67
Srrm4Q8BKA3 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Srrm4Q8BKA3 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Srrm4Q8BKA3 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Srrm4Q8BKA3 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Srrm4Q8BKA3 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Srrm4Q8BKA3 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Srrm4Q8BKA3 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Srrm4Q8BKA3 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Srrm4Q8BKA3 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Srrm4Q8BKA3 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Srrm4Q8BKA3 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC10.84□□□□□ -0.67
Srrm4Q8BKA3 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Srrm4Q8BKA3 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Srrm4Q8BKA3 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Srrm4Q8BKA3 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC10.84□□□□□ -0.67
Srrm4Q8BKA3 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Srrm4Q8BKA3 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Srrm4Q8BKA3 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Srrm4Q8BKA3 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Srrm4Q8BKA3 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC10.84□□□□□ -0.67
Srrm4Q8BKA3 Gm15198-201ENSMUST00000117283 177 ntBASIC10.84□□□□□ -0.67
Srrm4Q8BKA3 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Srrm4Q8BKA3 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Srrm4Q8BKA3 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Srrm4Q8BKA3 Gm27516-201ENSMUST00000184237 98 ntBASIC10.84□□□□□ -0.67
Srrm4Q8BKA3 Gm29396-201ENSMUST00000185659 716 ntBASIC10.84□□□□□ -0.67
Srrm4Q8BKA3 Gm6007-201ENSMUST00000208170 823 ntBASIC10.84□□□□□ -0.67
Srrm4Q8BKA3 Gm5904-201ENSMUST00000210286 865 ntBASIC10.84□□□□□ -0.67
Srrm4Q8BKA3 Gm8227-201ENSMUST00000223306 571 ntBASIC10.84□□□□□ -0.67
Srrm4Q8BKA3 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Srrm4Q8BKA3 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Srrm4Q8BKA3 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Srrm4Q8BKA3 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Srrm4Q8BKA3 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Srrm4Q8BKA3 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC10.84□□□□□ -0.67
Srrm4Q8BKA3 Gm3756-201ENSMUST00000169182 1355 ntBASIC10.84□□□□□ -0.67
Srrm4Q8BKA3 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Srrm4Q8BKA3 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Srrm4Q8BKA3 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC10.84□□□□□ -0.67
Srrm4Q8BKA3 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Srrm4Q8BKA3 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Srrm4Q8BKA3 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Srrm4Q8BKA3 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Srrm4Q8BKA3 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC10.84□□□□□ -0.67
Srrm4Q8BKA3 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Srrm4Q8BKA3 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Srrm4Q8BKA3 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Srrm4Q8BKA3 Gm6210-201ENSMUST00000204734 1942 ntBASIC10.84□□□□□ -0.67
Srrm4Q8BKA3 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC10.84□□□□□ -0.67
Srrm4Q8BKA3 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Srrm4Q8BKA3 Gm37827-201ENSMUST00000194486 1542 ntBASIC10.84□□□□□ -0.67
Srrm4Q8BKA3 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Srrm4Q8BKA3 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Srrm4Q8BKA3 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Srrm4Q8BKA3 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Srrm4Q8BKA3 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Srrm4Q8BKA3 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Srrm4Q8BKA3 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Srrm4Q8BKA3 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Srrm4Q8BKA3 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Srrm4Q8BKA3 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Srrm4Q8BKA3 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Srrm4Q8BKA3 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC10.83□□□□□ -0.68
Srrm4Q8BKA3 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC10.83□□□□□ -0.68
Srrm4Q8BKA3 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Srrm4Q8BKA3 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Srrm4Q8BKA3 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Srrm4Q8BKA3 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms