Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC11.79□□□□□ -0.52
Clrn3Q8BHH8 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC11.79□□□□□ -0.52
Clrn3Q8BHH8 Tyms-ps-201ENSMUST00000219550 915 ntBASIC11.79□□□□□ -0.52
Clrn3Q8BHH8 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Clrn3Q8BHH8 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Clrn3Q8BHH8 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Clrn3Q8BHH8 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Clrn3Q8BHH8 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Clrn3Q8BHH8 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Clrn3Q8BHH8 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC11.79□□□□□ -0.52
Clrn3Q8BHH8 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Clrn3Q8BHH8 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Clrn3Q8BHH8 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Clrn3Q8BHH8 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Clrn3Q8BHH8 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Clrn3Q8BHH8 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Clrn3Q8BHH8 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC11.79□□□□□ -0.52
Clrn3Q8BHH8 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Clrn3Q8BHH8 Gm12846-201ENSMUST00000120431 1373 ntBASIC11.79□□□□□ -0.52
Clrn3Q8BHH8 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC11.79□□□□□ -0.52
Clrn3Q8BHH8 Gm6992-201ENSMUST00000217973 1607 ntBASIC11.78□□□□□ -0.52
Clrn3Q8BHH8 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Clrn3Q8BHH8 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Clrn3Q8BHH8 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Clrn3Q8BHH8 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Clrn3Q8BHH8 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Clrn3Q8BHH8 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
Clrn3Q8BHH8 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Clrn3Q8BHH8 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Clrn3Q8BHH8 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Clrn3Q8BHH8 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Clrn3Q8BHH8 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Clrn3Q8BHH8 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Clrn3Q8BHH8 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Clrn3Q8BHH8 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Clrn3Q8BHH8 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Clrn3Q8BHH8 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Clrn3Q8BHH8 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Clrn3Q8BHH8 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Clrn3Q8BHH8 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
Clrn3Q8BHH8 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC11.78□□□□□ -0.52
Clrn3Q8BHH8 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Clrn3Q8BHH8 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC11.78□□□□□ -0.52
Clrn3Q8BHH8 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC11.78□□□□□ -0.52
Clrn3Q8BHH8 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Clrn3Q8BHH8 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC11.78□□□□□ -0.52
Clrn3Q8BHH8 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Clrn3Q8BHH8 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Clrn3Q8BHH8 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC11.78□□□□□ -0.52
Clrn3Q8BHH8 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Clrn3Q8BHH8 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Clrn3Q8BHH8 Gm27731-201ENSMUST00000185192 107 ntBASIC11.78□□□□□ -0.52
Clrn3Q8BHH8 Gm6652-201ENSMUST00000186414 1070 ntBASIC11.78□□□□□ -0.52
Clrn3Q8BHH8 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Clrn3Q8BHH8 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC11.78□□□□□ -0.52
Clrn3Q8BHH8 AC122459.1-201ENSMUST00000228373 885 ntBASIC11.78□□□□□ -0.52
Clrn3Q8BHH8 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Clrn3Q8BHH8 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Clrn3Q8BHH8 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Clrn3Q8BHH8 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Clrn3Q8BHH8 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Clrn3Q8BHH8 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Clrn3Q8BHH8 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Clrn3Q8BHH8 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Clrn3Q8BHH8 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Clrn3Q8BHH8 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC11.78□□□□□ -0.52
Clrn3Q8BHH8 AC166359.1-201ENSMUST00000220243 1871 ntBASIC11.78□□□□□ -0.52
Clrn3Q8BHH8 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Clrn3Q8BHH8 AC157950.1-201ENSMUST00000217561 2168 ntBASIC11.78□□□□□ -0.52
Clrn3Q8BHH8 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Clrn3Q8BHH8 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Clrn3Q8BHH8 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Clrn3Q8BHH8 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC11.77□□□□□ -0.52
Clrn3Q8BHH8 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Clrn3Q8BHH8 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Clrn3Q8BHH8 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC11.77□□□□□ -0.52
Clrn3Q8BHH8 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Clrn3Q8BHH8 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Clrn3Q8BHH8 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Clrn3Q8BHH8 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Clrn3Q8BHH8 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Clrn3Q8BHH8 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Clrn3Q8BHH8 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Clrn3Q8BHH8 Gm28323-201ENSMUST00000186817 2499 ntBASIC11.77□□□□□ -0.53
Clrn3Q8BHH8 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Clrn3Q8BHH8 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Clrn3Q8BHH8 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Clrn3Q8BHH8 Gm13226-201ENSMUST00000117838 404 ntBASIC11.77□□□□□ -0.53
Clrn3Q8BHH8 Gm12363-201ENSMUST00000122250 668 ntBASIC11.77□□□□□ -0.53
Clrn3Q8BHH8 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC11.77□□□□□ -0.53
Clrn3Q8BHH8 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC11.77□□□□□ -0.53
Clrn3Q8BHH8 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Clrn3Q8BHH8 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC11.77□□□□□ -0.53
Clrn3Q8BHH8 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Clrn3Q8BHH8 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Clrn3Q8BHH8 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Clrn3Q8BHH8 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC11.77□□□□□ -0.53
Clrn3Q8BHH8 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Clrn3Q8BHH8 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Clrn3Q8BHH8 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms