Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Pif1Q80SX8 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pif1Q80SX8 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pif1Q80SX8 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Pif1Q80SX8 Gm14208-201ENSMUST00000119645 678 ntBASIC11.63□□□□□ -0.55
Pif1Q80SX8 Gm12291-201ENSMUST00000121627 311 ntBASIC11.63□□□□□ -0.55
Pif1Q80SX8 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Pif1Q80SX8 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Pif1Q80SX8 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pif1Q80SX8 Gm44651-201ENSMUST00000207343 372 ntBASIC11.63□□□□□ -0.55
Pif1Q80SX8 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Pif1Q80SX8 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC11.63□□□□□ -0.55
Pif1Q80SX8 AC108416.1-202ENSMUST00000228927 1201 ntBASIC11.63□□□□□ -0.55
Pif1Q80SX8 Gm8385-201ENSMUST00000058999 643 ntBASIC11.63□□□□□ -0.55
Pif1Q80SX8 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pif1Q80SX8 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pif1Q80SX8 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pif1Q80SX8 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pif1Q80SX8 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pif1Q80SX8 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC11.63□□□□□ -0.55
Pif1Q80SX8 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Pif1Q80SX8 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC11.63□□□□□ -0.55
Pif1Q80SX8 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Pif1Q80SX8 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Pif1Q80SX8 Gm4864-201ENSMUST00000219894 1461 ntBASIC11.63□□□□□ -0.55
Pif1Q80SX8 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Pif1Q80SX8 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pif1Q80SX8 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pif1Q80SX8 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC11.62□□□□□ -0.55
Pif1Q80SX8 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pif1Q80SX8 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Pif1Q80SX8 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC11.62□□□□□ -0.55
Pif1Q80SX8 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Pif1Q80SX8 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pif1Q80SX8 AC126444.1-201ENSMUST00000225938 1768 ntBASIC11.62□□□□□ -0.55
Pif1Q80SX8 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pif1Q80SX8 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pif1Q80SX8 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC11.62□□□□□ -0.55
Pif1Q80SX8 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pif1Q80SX8 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pif1Q80SX8 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC11.62□□□□□ -0.55
Pif1Q80SX8 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Pif1Q80SX8 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC11.62□□□□□ -0.55
Pif1Q80SX8 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC11.62□□□□□ -0.55
Pif1Q80SX8 Gm13736-201ENSMUST00000119272 253 ntBASIC11.62□□□□□ -0.55
Pif1Q80SX8 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC11.62□□□□□ -0.55
Pif1Q80SX8 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC11.62□□□□□ -0.55
Pif1Q80SX8 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC11.62□□□□□ -0.55
Pif1Q80SX8 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC11.62□□□□□ -0.55
Pif1Q80SX8 Gm8856-201ENSMUST00000185254 1144 ntBASIC11.62□□□□□ -0.55
Pif1Q80SX8 Gm37986-201ENSMUST00000193285 383 ntBASIC11.62□□□□□ -0.55
Pif1Q80SX8 Gm42997-202ENSMUST00000200321 985 ntBASIC11.62□□□□□ -0.55
Pif1Q80SX8 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Pif1Q80SX8 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC11.62□□□□□ -0.55
Pif1Q80SX8 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC11.62□□□□□ -0.55
Pif1Q80SX8 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC11.62□□□□□ -0.55
Pif1Q80SX8 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Pif1Q80SX8 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC11.62□□□□□ -0.55
Pif1Q80SX8 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pif1Q80SX8 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pif1Q80SX8 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pif1Q80SX8 Gm9025-201ENSMUST00000122415 1575 ntBASIC11.62□□□□□ -0.55
Pif1Q80SX8 AC113060.1-201ENSMUST00000225689 1573 ntBASIC11.62□□□□□ -0.55
Pif1Q80SX8 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC11.62□□□□□ -0.55
Pif1Q80SX8 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Pif1Q80SX8 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pif1Q80SX8 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Pif1Q80SX8 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pif1Q80SX8 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Pif1Q80SX8 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Pif1Q80SX8 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Pif1Q80SX8 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pif1Q80SX8 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pif1Q80SX8 Upf3b-201ENSMUST00000076265 2344 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pif1Q80SX8 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pif1Q80SX8 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pif1Q80SX8 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Pif1Q80SX8 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pif1Q80SX8 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pif1Q80SX8 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pif1Q80SX8 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pif1Q80SX8 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pif1Q80SX8 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Pif1Q80SX8 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Pif1Q80SX8 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pif1Q80SX8 Gm44745-201ENSMUST00000206563 2723 ntBASIC11.61□□□□□ -0.55
Pif1Q80SX8 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pif1Q80SX8 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pif1Q80SX8 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC11.61□□□□□ -0.55
Pif1Q80SX8 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pif1Q80SX8 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
Pif1Q80SX8 Gm20633-201ENSMUST00000176742 2831 ntBASIC11.61□□□□□ -0.55
Pif1Q80SX8 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pif1Q80SX8 Gm2673-201ENSMUST00000120958 1608 ntBASIC11.61□□□□□ -0.55
Pif1Q80SX8 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pif1Q80SX8 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pif1Q80SX8 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pif1Q80SX8 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pif1Q80SX8 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pif1Q80SX8 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms