Protein–RNA interactions for Protein: Q7TMV1

Rnf139, E3 ubiquitin-protein ligase RNF139, mousemouse

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf139Q7TMV1 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Rnf139Q7TMV1 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf139Q7TMV1 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC13.35□□□□□ -0.27
Rnf139Q7TMV1 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC13.35□□□□□ -0.27
Rnf139Q7TMV1 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf139Q7TMV1 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf139Q7TMV1 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf139Q7TMV1 Gm44260-201ENSMUST00000204946 2094 ntBASIC13.35□□□□□ -0.27
Rnf139Q7TMV1 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf139Q7TMV1 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf139Q7TMV1 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf139Q7TMV1 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf139Q7TMV1 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf139Q7TMV1 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf139Q7TMV1 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf139Q7TMV1 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf139Q7TMV1 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Rnf139Q7TMV1 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf139Q7TMV1 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf139Q7TMV1 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf139Q7TMV1 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
Rnf139Q7TMV1 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Rnf139Q7TMV1 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC13.34□□□□□ -0.27
Rnf139Q7TMV1 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf139Q7TMV1 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC13.34□□□□□ -0.27
Rnf139Q7TMV1 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf139Q7TMV1 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC13.34□□□□□ -0.27
Rnf139Q7TMV1 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf139Q7TMV1 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf139Q7TMV1 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
Rnf139Q7TMV1 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Rnf139Q7TMV1 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Rnf139Q7TMV1 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC13.34□□□□□ -0.27
Rnf139Q7TMV1 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC13.34□□□□□ -0.27
Rnf139Q7TMV1 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf139Q7TMV1 AC159896.2-201ENSMUST00000214753 269 ntBASIC13.34□□□□□ -0.27
Rnf139Q7TMV1 AC154319.1-201ENSMUST00000216330 312 ntBASIC13.34□□□□□ -0.27
Rnf139Q7TMV1 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf139Q7TMV1 AL589735.1-201ENSMUST00000224353 270 ntBASIC13.34□□□□□ -0.27
Rnf139Q7TMV1 Cts7-204ENSMUST00000225321 1257 ntBASIC13.34□□□□□ -0.27
Rnf139Q7TMV1 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf139Q7TMV1 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf139Q7TMV1 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Rnf139Q7TMV1 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Rnf139Q7TMV1 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Rnf139Q7TMV1 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf139Q7TMV1 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf139Q7TMV1 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Rnf139Q7TMV1 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf139Q7TMV1 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf139Q7TMV1 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf139Q7TMV1 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf139Q7TMV1 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf139Q7TMV1 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf139Q7TMV1 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Rnf139Q7TMV1 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Rnf139Q7TMV1 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Rnf139Q7TMV1 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
Rnf139Q7TMV1 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
Rnf139Q7TMV1 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Rnf139Q7TMV1 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rnf139Q7TMV1 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rnf139Q7TMV1 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rnf139Q7TMV1 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rnf139Q7TMV1 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Rnf139Q7TMV1 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rnf139Q7TMV1 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rnf139Q7TMV1 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC13.33□□□□□ -0.28
Rnf139Q7TMV1 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC13.33□□□□□ -0.28
Rnf139Q7TMV1 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rnf139Q7TMV1 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rnf139Q7TMV1 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC13.33□□□□□ -0.28
Rnf139Q7TMV1 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC13.33□□□□□ -0.28
Rnf139Q7TMV1 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rnf139Q7TMV1 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Rnf139Q7TMV1 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC13.33□□□□□ -0.28
Rnf139Q7TMV1 Gm44958-201ENSMUST00000203734 736 ntBASIC13.33□□□□□ -0.28
Rnf139Q7TMV1 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC13.33□□□□□ -0.28
Rnf139Q7TMV1 Gm45331-201ENSMUST00000209868 554 ntBASIC13.33□□□□□ -0.28
Rnf139Q7TMV1 Gm30285-201ENSMUST00000214614 422 ntBASIC13.33□□□□□ -0.28
Rnf139Q7TMV1 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rnf139Q7TMV1 Gm17383-201ENSMUST00000078739 1041 ntBASIC13.33□□□□□ -0.28
Rnf139Q7TMV1 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC13.33□□□□□ -0.28
Rnf139Q7TMV1 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rnf139Q7TMV1 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rnf139Q7TMV1 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rnf139Q7TMV1 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rnf139Q7TMV1 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rnf139Q7TMV1 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rnf139Q7TMV1 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rnf139Q7TMV1 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rnf139Q7TMV1 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Rnf139Q7TMV1 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rnf139Q7TMV1 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC13.33□□□□□ -0.28
Rnf139Q7TMV1 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rnf139Q7TMV1 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rnf139Q7TMV1 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rnf139Q7TMV1 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC13.32□□□□□ -0.28
Rnf139Q7TMV1 Gm7114-201ENSMUST00000190159 1789 ntBASIC13.32□□□□□ -0.28
Rnf139Q7TMV1 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 83.8 ms