Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Smarcd3Q6P9Z1 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smarcd3Q6P9Z1 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smarcd3Q6P9Z1 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smarcd3Q6P9Z1 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
Smarcd3Q6P9Z1 Mbnl2-204ENSMUST00000227012 2390 ntBASIC11.46□□□□□ -0.57
Smarcd3Q6P9Z1 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smarcd3Q6P9Z1 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smarcd3Q6P9Z1 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Smarcd3Q6P9Z1 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Smarcd3Q6P9Z1 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smarcd3Q6P9Z1 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC11.46□□□□□ -0.57
Smarcd3Q6P9Z1 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Smarcd3Q6P9Z1 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smarcd3Q6P9Z1 Gm11637-201ENSMUST00000120601 592 ntBASIC11.46□□□□□ -0.57
Smarcd3Q6P9Z1 Gm16479-201ENSMUST00000121706 932 ntBASIC11.46□□□□□ -0.57
Smarcd3Q6P9Z1 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Smarcd3Q6P9Z1 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.57
Smarcd3Q6P9Z1 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Smarcd3Q6P9Z1 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smarcd3Q6P9Z1 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Smarcd3Q6P9Z1 Gm8515-201ENSMUST00000194852 576 ntBASIC11.46□□□□□ -0.57
Smarcd3Q6P9Z1 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Smarcd3Q6P9Z1 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC11.46□□□□□ -0.57
Smarcd3Q6P9Z1 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smarcd3Q6P9Z1 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smarcd3Q6P9Z1 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Smarcd3Q6P9Z1 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Smarcd3Q6P9Z1 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Smarcd3Q6P9Z1 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Smarcd3Q6P9Z1 Gm43051-201ENSMUST00000201096 2678 ntBASIC11.46□□□□□ -0.58
Smarcd3Q6P9Z1 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Smarcd3Q6P9Z1 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Smarcd3Q6P9Z1 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Smarcd3Q6P9Z1 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Smarcd3Q6P9Z1 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Smarcd3Q6P9Z1 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Smarcd3Q6P9Z1 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC11.46□□□□□ -0.58
Smarcd3Q6P9Z1 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Smarcd3Q6P9Z1 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Smarcd3Q6P9Z1 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Smarcd3Q6P9Z1 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.58
Smarcd3Q6P9Z1 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.58
Smarcd3Q6P9Z1 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Smarcd3Q6P9Z1 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Smarcd3Q6P9Z1 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC11.45□□□□□ -0.58
Smarcd3Q6P9Z1 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC11.45□□□□□ -0.58
Smarcd3Q6P9Z1 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smarcd3Q6P9Z1 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Smarcd3Q6P9Z1 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smarcd3Q6P9Z1 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smarcd3Q6P9Z1 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smarcd3Q6P9Z1 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smarcd3Q6P9Z1 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smarcd3Q6P9Z1 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smarcd3Q6P9Z1 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smarcd3Q6P9Z1 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smarcd3Q6P9Z1 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Smarcd3Q6P9Z1 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Smarcd3Q6P9Z1 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smarcd3Q6P9Z1 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smarcd3Q6P9Z1 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Smarcd3Q6P9Z1 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smarcd3Q6P9Z1 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC11.45□□□□□ -0.58
Smarcd3Q6P9Z1 Gm2231-201ENSMUST00000125661 612 ntBASIC11.45□□□□□ -0.58
Smarcd3Q6P9Z1 Gm12091-201ENSMUST00000146791 830 ntBASIC11.45□□□□□ -0.58
Smarcd3Q6P9Z1 Gm26185-201ENSMUST00000157692 266 ntBASIC11.45□□□□□ -0.58
Smarcd3Q6P9Z1 Gm22121-201ENSMUST00000175148 54 ntBASIC11.45□□□□□ -0.58
Smarcd3Q6P9Z1 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Smarcd3Q6P9Z1 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC11.45□□□□□ -0.58
Smarcd3Q6P9Z1 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC11.45□□□□□ -0.58
Smarcd3Q6P9Z1 Gm10371-202ENSMUST00000228010 1081 ntBASIC11.45□□□□□ -0.58
Smarcd3Q6P9Z1 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smarcd3Q6P9Z1 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smarcd3Q6P9Z1 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smarcd3Q6P9Z1 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC11.45□□□□□ -0.58
Smarcd3Q6P9Z1 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Smarcd3Q6P9Z1 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smarcd3Q6P9Z1 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC11.45□□□□□ -0.58
Smarcd3Q6P9Z1 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smarcd3Q6P9Z1 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Smarcd3Q6P9Z1 AC157950.1-201ENSMUST00000217561 2168 ntBASIC11.45□□□□□ -0.58
Smarcd3Q6P9Z1 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smarcd3Q6P9Z1 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Smarcd3Q6P9Z1 Gm5053-201ENSMUST00000208361 1678 ntBASIC11.45□□□□□ -0.58
Smarcd3Q6P9Z1 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smarcd3Q6P9Z1 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smarcd3Q6P9Z1 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smarcd3Q6P9Z1 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smarcd3Q6P9Z1 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smarcd3Q6P9Z1 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC11.45□□□□□ -0.58
Smarcd3Q6P9Z1 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smarcd3Q6P9Z1 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC11.44□□□□□ -0.58
Smarcd3Q6P9Z1 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC11.44□□□□□ -0.58
Smarcd3Q6P9Z1 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smarcd3Q6P9Z1 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smarcd3Q6P9Z1 Gm1995-201ENSMUST00000220838 2602 ntBASIC11.44□□□□□ -0.58
Smarcd3Q6P9Z1 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC11.44□□□□□ -0.58
Smarcd3Q6P9Z1 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Smarcd3Q6P9Z1 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms