Protein–RNA interactions for Protein: Q6P1D7

Slx4, Structure-specific endonuclease subunit SLX4, mousemouse

Predictions only

Length 1,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slx4Q6P1D7 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Slx4Q6P1D7 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Slx4Q6P1D7 Gm43677-201ENSMUST00000198098 2378 ntBASIC18.87■□□□□ 0.61
Slx4Q6P1D7 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Slx4Q6P1D7 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Slx4Q6P1D7 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Slx4Q6P1D7 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Slx4Q6P1D7 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Slx4Q6P1D7 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Slx4Q6P1D7 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Slx4Q6P1D7 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
Slx4Q6P1D7 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Slx4Q6P1D7 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Slx4Q6P1D7 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Slx4Q6P1D7 Gm13549-201ENSMUST00000118339 796 ntBASIC18.87■□□□□ 0.61
Slx4Q6P1D7 Gm14942-201ENSMUST00000119642 336 ntBASIC18.87■□□□□ 0.61
Slx4Q6P1D7 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Slx4Q6P1D7 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Slx4Q6P1D7 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Slx4Q6P1D7 Gm4862-201ENSMUST00000170405 438 ntBASIC18.87■□□□□ 0.61
Slx4Q6P1D7 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Slx4Q6P1D7 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC18.87■□□□□ 0.61
Slx4Q6P1D7 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Slx4Q6P1D7 Gm37861-201ENSMUST00000193534 2869 ntBASIC18.87■□□□□ 0.61
Slx4Q6P1D7 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Slx4Q6P1D7 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Slx4Q6P1D7 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Slx4Q6P1D7 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Slx4Q6P1D7 AC154262.2-202ENSMUST00000225158 1331 ntBASIC18.87■□□□□ 0.61
Slx4Q6P1D7 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Slx4Q6P1D7 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Slx4Q6P1D7 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.87■□□□□ 0.61
Slx4Q6P1D7 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Slx4Q6P1D7 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Slx4Q6P1D7 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC18.86■□□□□ 0.61
Slx4Q6P1D7 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Slx4Q6P1D7 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Slx4Q6P1D7 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC18.86■□□□□ 0.61
Slx4Q6P1D7 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Slx4Q6P1D7 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC18.86■□□□□ 0.61
Slx4Q6P1D7 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC18.86■□□□□ 0.61
Slx4Q6P1D7 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Slx4Q6P1D7 AC136376.2-201ENSMUST00000228819 490 ntBASIC18.86■□□□□ 0.61
Slx4Q6P1D7 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Slx4Q6P1D7 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Slx4Q6P1D7 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Slx4Q6P1D7 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Slx4Q6P1D7 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Slx4Q6P1D7 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Slx4Q6P1D7 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Slx4Q6P1D7 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Slx4Q6P1D7 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Slx4Q6P1D7 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Slx4Q6P1D7 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Slx4Q6P1D7 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC18.86■□□□□ 0.61
Slx4Q6P1D7 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Slx4Q6P1D7 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Slx4Q6P1D7 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Slx4Q6P1D7 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Slx4Q6P1D7 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Slx4Q6P1D7 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC18.86■□□□□ 0.61
Slx4Q6P1D7 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC18.86■□□□□ 0.61
Slx4Q6P1D7 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
Slx4Q6P1D7 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Slx4Q6P1D7 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Slx4Q6P1D7 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
Slx4Q6P1D7 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Slx4Q6P1D7 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Slx4Q6P1D7 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Slx4Q6P1D7 Gm8038-201ENSMUST00000164674 2044 ntBASIC18.85■□□□□ 0.61
Slx4Q6P1D7 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Slx4Q6P1D7 Gm5621-201ENSMUST00000187303 640 ntBASIC18.85■□□□□ 0.61
Slx4Q6P1D7 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC18.85■□□□□ 0.61
Slx4Q6P1D7 Gm7902-201ENSMUST00000198842 947 ntBASIC18.85■□□□□ 0.61
Slx4Q6P1D7 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Slx4Q6P1D7 AC168279.1-201ENSMUST00000214611 382 ntBASIC18.85■□□□□ 0.61
Slx4Q6P1D7 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC18.85■□□□□ 0.61
Slx4Q6P1D7 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Slx4Q6P1D7 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Slx4Q6P1D7 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Slx4Q6P1D7 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Slx4Q6P1D7 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC18.85■□□□□ 0.61
Slx4Q6P1D7 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Slx4Q6P1D7 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Slx4Q6P1D7 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Slx4Q6P1D7 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Slx4Q6P1D7 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Slx4Q6P1D7 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Slx4Q6P1D7 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Slx4Q6P1D7 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Slx4Q6P1D7 Gm25063-201ENSMUST00000104666 94 ntBASIC18.85■□□□□ 0.61
Slx4Q6P1D7 Gm15207-201ENSMUST00000119259 442 ntBASIC18.85■□□□□ 0.61
Slx4Q6P1D7 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Slx4Q6P1D7 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Slx4Q6P1D7 Gm9116-201ENSMUST00000192400 1018 ntBASIC18.85■□□□□ 0.61
Slx4Q6P1D7 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC18.85■□□□□ 0.61
Slx4Q6P1D7 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC18.85■□□□□ 0.61
Slx4Q6P1D7 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Slx4Q6P1D7 Gm9661-201ENSMUST00000221611 1122 ntBASIC18.85■□□□□ 0.61
Slx4Q6P1D7 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms