Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sp140Q6NSQ5 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Sp140Q6NSQ5 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Sp140Q6NSQ5 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Sp140Q6NSQ5 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sp140Q6NSQ5 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC12.67□□□□□ -0.38
Sp140Q6NSQ5 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sp140Q6NSQ5 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sp140Q6NSQ5 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
Sp140Q6NSQ5 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Sp140Q6NSQ5 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.67□□□□□ -0.38
Sp140Q6NSQ5 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sp140Q6NSQ5 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Sp140Q6NSQ5 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sp140Q6NSQ5 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sp140Q6NSQ5 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sp140Q6NSQ5 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Sp140Q6NSQ5 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sp140Q6NSQ5 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sp140Q6NSQ5 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.66□□□□□ -0.38
Sp140Q6NSQ5 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sp140Q6NSQ5 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sp140Q6NSQ5 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.66□□□□□ -0.38
Sp140Q6NSQ5 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.66□□□□□ -0.38
Sp140Q6NSQ5 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.66□□□□□ -0.38
Sp140Q6NSQ5 Gm7789-202ENSMUST00000211273 1400 ntBASIC12.66□□□□□ -0.38
Sp140Q6NSQ5 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sp140Q6NSQ5 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Sp140Q6NSQ5 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sp140Q6NSQ5 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC12.66□□□□□ -0.38
Sp140Q6NSQ5 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Sp140Q6NSQ5 Gm13226-201ENSMUST00000117838 404 ntBASIC12.66□□□□□ -0.38
Sp140Q6NSQ5 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sp140Q6NSQ5 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sp140Q6NSQ5 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sp140Q6NSQ5 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Sp140Q6NSQ5 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.66□□□□□ -0.38
Sp140Q6NSQ5 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sp140Q6NSQ5 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
Sp140Q6NSQ5 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sp140Q6NSQ5 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sp140Q6NSQ5 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sp140Q6NSQ5 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sp140Q6NSQ5 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sp140Q6NSQ5 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Sp140Q6NSQ5 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sp140Q6NSQ5 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sp140Q6NSQ5 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sp140Q6NSQ5 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
Sp140Q6NSQ5 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sp140Q6NSQ5 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sp140Q6NSQ5 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sp140Q6NSQ5 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sp140Q6NSQ5 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sp140Q6NSQ5 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sp140Q6NSQ5 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sp140Q6NSQ5 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Sp140Q6NSQ5 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Sp140Q6NSQ5 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sp140Q6NSQ5 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sp140Q6NSQ5 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Sp140Q6NSQ5 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sp140Q6NSQ5 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.65□□□□□ -0.38
Sp140Q6NSQ5 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sp140Q6NSQ5 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sp140Q6NSQ5 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sp140Q6NSQ5 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sp140Q6NSQ5 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sp140Q6NSQ5 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Sp140Q6NSQ5 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Sp140Q6NSQ5 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC12.65□□□□□ -0.38
Sp140Q6NSQ5 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.65□□□□□ -0.38
Sp140Q6NSQ5 Gm8018-201ENSMUST00000173536 789 ntBASIC12.65□□□□□ -0.38
Sp140Q6NSQ5 Gm27243-201ENSMUST00000183964 521 ntBASIC12.65□□□□□ -0.38
Sp140Q6NSQ5 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Sp140Q6NSQ5 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Sp140Q6NSQ5 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC12.65□□□□□ -0.38
Sp140Q6NSQ5 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Sp140Q6NSQ5 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC12.65□□□□□ -0.38
Sp140Q6NSQ5 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC12.65□□□□□ -0.38
Sp140Q6NSQ5 Snora73a-201ENSMUST00000082453 205 ntBASIC12.65□□□□□ -0.38
Sp140Q6NSQ5 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
Sp140Q6NSQ5 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sp140Q6NSQ5 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Sp140Q6NSQ5 Dctn4-202ENSMUST00000223590 1530 ntBASIC12.65□□□□□ -0.38
Sp140Q6NSQ5 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.65□□□□□ -0.38
Sp140Q6NSQ5 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sp140Q6NSQ5 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sp140Q6NSQ5 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Sp140Q6NSQ5 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sp140Q6NSQ5 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sp140Q6NSQ5 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sp140Q6NSQ5 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sp140Q6NSQ5 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.65□□□□□ -0.38
Sp140Q6NSQ5 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Sp140Q6NSQ5 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
Sp140Q6NSQ5 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Sp140Q6NSQ5 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Sp140Q6NSQ5 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.39
Sp140Q6NSQ5 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 75.8 ms