Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Krt39Q6IFX4 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Krt39Q6IFX4 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Krt39Q6IFX4 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC13.8□□□□□ -0.2
Krt39Q6IFX4 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC13.8□□□□□ -0.2
Krt39Q6IFX4 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC13.8□□□□□ -0.2
Krt39Q6IFX4 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC13.8□□□□□ -0.2
Krt39Q6IFX4 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC13.8□□□□□ -0.2
Krt39Q6IFX4 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Krt39Q6IFX4 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC13.8□□□□□ -0.2
Krt39Q6IFX4 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Krt39Q6IFX4 Gm27839-201ENSMUST00000184242 106 ntBASIC13.8□□□□□ -0.2
Krt39Q6IFX4 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC13.8□□□□□ -0.2
Krt39Q6IFX4 AC098716.1-201ENSMUST00000213527 703 ntBASIC13.8□□□□□ -0.2
Krt39Q6IFX4 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC13.8□□□□□ -0.2
Krt39Q6IFX4 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Krt39Q6IFX4 Gm10012-201ENSMUST00000078252 192 ntBASIC13.8□□□□□ -0.2
Krt39Q6IFX4 n-R5s77-201ENSMUST00000083757 119 ntBASIC13.8□□□□□ -0.2
Krt39Q6IFX4 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Krt39Q6IFX4 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Krt39Q6IFX4 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Krt39Q6IFX4 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Krt39Q6IFX4 Gm43727-201ENSMUST00000198021 2647 ntBASIC13.8□□□□□ -0.2
Krt39Q6IFX4 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC13.8□□□□□ -0.2
Krt39Q6IFX4 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Krt39Q6IFX4 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Krt39Q6IFX4 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Krt39Q6IFX4 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC13.8□□□□□ -0.2
Krt39Q6IFX4 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC13.8□□□□□ -0.2
Krt39Q6IFX4 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Krt39Q6IFX4 Rubie-203ENSMUST00000227803 2430 ntBASIC13.8□□□□□ -0.2
Krt39Q6IFX4 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Krt39Q6IFX4 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Krt39Q6IFX4 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Krt39Q6IFX4 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Krt39Q6IFX4 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Krt39Q6IFX4 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Krt39Q6IFX4 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Krt39Q6IFX4 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Krt39Q6IFX4 Arhgef3-204ENSMUST00000225949 3198 ntBASIC13.79□□□□□ -0.2
Krt39Q6IFX4 Ptprm-203ENSMUST00000224091 3773 ntBASIC13.79□□□□□ -0.2
Krt39Q6IFX4 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Krt39Q6IFX4 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Krt39Q6IFX4 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Krt39Q6IFX4 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Krt39Q6IFX4 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
Krt39Q6IFX4 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Krt39Q6IFX4 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
Krt39Q6IFX4 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC13.79□□□□□ -0.2
Krt39Q6IFX4 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Krt39Q6IFX4 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Krt39Q6IFX4 Mup-ps23-201ENSMUST00000118063 630 ntBASIC13.79□□□□□ -0.2
Krt39Q6IFX4 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC13.79□□□□□ -0.2
Krt39Q6IFX4 Gm5863-201ENSMUST00000121760 1008 ntBASIC13.79□□□□□ -0.2
Krt39Q6IFX4 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC13.79□□□□□ -0.2
Krt39Q6IFX4 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Krt39Q6IFX4 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Krt39Q6IFX4 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC13.79□□□□□ -0.2
Krt39Q6IFX4 Gm38092-201ENSMUST00000195600 653 ntBASIC13.79□□□□□ -0.2
Krt39Q6IFX4 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC13.79□□□□□ -0.2
Krt39Q6IFX4 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Krt39Q6IFX4 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC13.79□□□□□ -0.2
Krt39Q6IFX4 Gm2824-203ENSMUST00000226189 1228 ntBASIC13.79□□□□□ -0.2
Krt39Q6IFX4 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Krt39Q6IFX4 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Krt39Q6IFX4 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Krt39Q6IFX4 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC13.79□□□□□ -0.2
Krt39Q6IFX4 AC122860.2-201ENSMUST00000217967 2671 ntBASIC13.79□□□□□ -0.2
Krt39Q6IFX4 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Krt39Q6IFX4 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Krt39Q6IFX4 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Krt39Q6IFX4 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Krt39Q6IFX4 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Krt39Q6IFX4 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Krt39Q6IFX4 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Krt39Q6IFX4 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Krt39Q6IFX4 Mypopos-202ENSMUST00000205975 2321 ntBASIC13.79□□□□□ -0.2
Krt39Q6IFX4 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Krt39Q6IFX4 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Krt39Q6IFX4 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Krt39Q6IFX4 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Krt39Q6IFX4 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Krt39Q6IFX4 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Krt39Q6IFX4 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Krt39Q6IFX4 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Krt39Q6IFX4 Gm2238-201ENSMUST00000192074 3669 ntBASIC13.78□□□□□ -0.2
Krt39Q6IFX4 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Krt39Q6IFX4 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Krt39Q6IFX4 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Krt39Q6IFX4 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Krt39Q6IFX4 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Krt39Q6IFX4 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Krt39Q6IFX4 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Krt39Q6IFX4 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC13.78□□□□□ -0.2
Krt39Q6IFX4 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Krt39Q6IFX4 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Krt39Q6IFX4 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Krt39Q6IFX4 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Krt39Q6IFX4 Gm4984-201ENSMUST00000115987 360 ntBASIC13.78□□□□□ -0.2
Krt39Q6IFX4 Gm11814-201ENSMUST00000119515 929 ntBASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 82.1 ms