Protein–RNA interactions for Protein: Q64729

Tgfbr1, TGF-beta receptor type-1, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr1Q64729 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Tgfbr1Q64729 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC10.22□□□□□ -0.77
Tgfbr1Q64729 Mir7654-201ENSMUST00000185082 70 ntBASIC10.22□□□□□ -0.77
Tgfbr1Q64729 Gm28693-202ENSMUST00000190758 331 ntBASIC10.22□□□□□ -0.77
Tgfbr1Q64729 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC10.22□□□□□ -0.77
Tgfbr1Q64729 Gm37917-201ENSMUST00000194711 392 ntBASIC10.22□□□□□ -0.77
Tgfbr1Q64729 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC10.22□□□□□ -0.77
Tgfbr1Q64729 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC10.22□□□□□ -0.77
Tgfbr1Q64729 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tgfbr1Q64729 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tgfbr1Q64729 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC10.22□□□□□ -0.77
Tgfbr1Q64729 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tgfbr1Q64729 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tgfbr1Q64729 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tgfbr1Q64729 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tgfbr1Q64729 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Tgfbr1Q64729 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tgfbr1Q64729 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tgfbr1Q64729 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Tgfbr1Q64729 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tgfbr1Q64729 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Tgfbr1Q64729 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tgfbr1Q64729 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tgfbr1Q64729 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tgfbr1Q64729 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC10.22□□□□□ -0.77
Tgfbr1Q64729 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tgfbr1Q64729 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Tgfbr1Q64729 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tgfbr1Q64729 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tgfbr1Q64729 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Tgfbr1Q64729 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC10.21□□□□□ -0.77
Tgfbr1Q64729 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Tgfbr1Q64729 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
Tgfbr1Q64729 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Tgfbr1Q64729 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Tgfbr1Q64729 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Tgfbr1Q64729 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Tgfbr1Q64729 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC10.21□□□□□ -0.77
Tgfbr1Q64729 Daam2-202ENSMUST00000224595 1926 ntBASIC10.21□□□□□ -0.77
Tgfbr1Q64729 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Tgfbr1Q64729 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Tgfbr1Q64729 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC10.21□□□□□ -0.77
Tgfbr1Q64729 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Tgfbr1Q64729 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC10.21□□□□□ -0.77
Tgfbr1Q64729 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Tgfbr1Q64729 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Tgfbr1Q64729 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Tgfbr1Q64729 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
Tgfbr1Q64729 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Tgfbr1Q64729 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Tgfbr1Q64729 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Tgfbr1Q64729 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Tgfbr1Q64729 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Tgfbr1Q64729 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Tgfbr1Q64729 Mir6392-201ENSMUST00000184924 108 ntBASIC10.21□□□□□ -0.77
Tgfbr1Q64729 Gm38114-201ENSMUST00000191877 1232 ntBASIC10.21□□□□□ -0.77
Tgfbr1Q64729 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC10.21□□□□□ -0.77
Tgfbr1Q64729 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC10.21□□□□□ -0.77
Tgfbr1Q64729 Gm45484-201ENSMUST00000210310 1141 ntBASIC10.21□□□□□ -0.77
Tgfbr1Q64729 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Tgfbr1Q64729 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC10.21□□□□□ -0.77
Tgfbr1Q64729 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC10.21□□□□□ -0.77
Tgfbr1Q64729 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC10.21□□□□□ -0.77
Tgfbr1Q64729 Gm18624-201ENSMUST00000220966 658 ntBASIC10.21□□□□□ -0.77
Tgfbr1Q64729 AC238811.3-201ENSMUST00000225422 709 ntBASIC10.21□□□□□ -0.77
Tgfbr1Q64729 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Tgfbr1Q64729 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC10.21□□□□□ -0.77
Tgfbr1Q64729 Gm16372-201ENSMUST00000073088 450 ntBASIC10.21□□□□□ -0.77
Tgfbr1Q64729 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Tgfbr1Q64729 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Tgfbr1Q64729 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC10.21□□□□□ -0.77
Tgfbr1Q64729 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
Tgfbr1Q64729 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Tgfbr1Q64729 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Tgfbr1Q64729 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC10.21□□□□□ -0.78
Tgfbr1Q64729 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
Tgfbr1Q64729 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Tgfbr1Q64729 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Tgfbr1Q64729 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Tgfbr1Q64729 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Tgfbr1Q64729 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Tgfbr1Q64729 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
Tgfbr1Q64729 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Tgfbr1Q64729 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC10.21□□□□□ -0.78
Tgfbr1Q64729 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Tgfbr1Q64729 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Tgfbr1Q64729 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Tgfbr1Q64729 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC10.2□□□□□ -0.78
Tgfbr1Q64729 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Tgfbr1Q64729 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tgfbr1Q64729 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Tgfbr1Q64729 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tgfbr1Q64729 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC10.2□□□□□ -0.78
Tgfbr1Q64729 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tgfbr1Q64729 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC10.2□□□□□ -0.78
Tgfbr1Q64729 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tgfbr1Q64729 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tgfbr1Q64729 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC10.2□□□□□ -0.78
Tgfbr1Q64729 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Tgfbr1Q64729 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC10.2□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 101.9 ms