Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
VclQ64727 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.32□□□□□ -0.44
VclQ64727 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
VclQ64727 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
VclQ64727 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
VclQ64727 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC12.31□□□□□ -0.44
VclQ64727 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
VclQ64727 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
VclQ64727 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
VclQ64727 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
VclQ64727 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
VclQ64727 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
VclQ64727 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
VclQ64727 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.31□□□□□ -0.44
VclQ64727 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
VclQ64727 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
VclQ64727 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
VclQ64727 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
VclQ64727 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
VclQ64727 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
VclQ64727 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
VclQ64727 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC12.31□□□□□ -0.44
VclQ64727 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
VclQ64727 Rmrp-201ENSMUST00000157463 271 ntBASIC12.31□□□□□ -0.44
VclQ64727 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
VclQ64727 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC12.31□□□□□ -0.44
VclQ64727 Gm5597-201ENSMUST00000182353 1193 ntBASIC12.31□□□□□ -0.44
VclQ64727 Gm37201-201ENSMUST00000191845 523 ntBASIC12.31□□□□□ -0.44
VclQ64727 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
VclQ64727 Gm7172-201ENSMUST00000218047 1152 ntBASIC12.31□□□□□ -0.44
VclQ64727 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
VclQ64727 Cts7-204ENSMUST00000225321 1257 ntBASIC12.31□□□□□ -0.44
VclQ64727 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.31□□□□□ -0.44
VclQ64727 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
VclQ64727 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
VclQ64727 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
VclQ64727 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
VclQ64727 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
VclQ64727 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
VclQ64727 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
VclQ64727 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
VclQ64727 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.31□□□□□ -0.44
VclQ64727 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
VclQ64727 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
VclQ64727 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
VclQ64727 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.31□□□□□ -0.44
VclQ64727 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
VclQ64727 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
VclQ64727 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
VclQ64727 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
VclQ64727 Gm38376-201ENSMUST00000195493 2253 ntBASIC12.31□□□□□ -0.44
VclQ64727 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
VclQ64727 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
VclQ64727 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
VclQ64727 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
VclQ64727 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.31□□□□□ -0.44
VclQ64727 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
VclQ64727 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
VclQ64727 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
VclQ64727 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
VclQ64727 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC12.3□□□□□ -0.44
VclQ64727 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
VclQ64727 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
VclQ64727 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
VclQ64727 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
VclQ64727 Gm14381-201ENSMUST00000122105 414 ntBASIC12.3□□□□□ -0.44
VclQ64727 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
VclQ64727 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC12.3□□□□□ -0.44
VclQ64727 Mir8109-201ENSMUST00000184375 117 ntBASIC12.3□□□□□ -0.44
VclQ64727 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC12.3□□□□□ -0.44
VclQ64727 Gm6621-201ENSMUST00000193251 772 ntBASIC12.3□□□□□ -0.44
VclQ64727 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC12.3□□□□□ -0.44
VclQ64727 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
VclQ64727 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
VclQ64727 Gm6334-201ENSMUST00000207083 228 ntBASIC12.3□□□□□ -0.44
VclQ64727 Gm21769-201ENSMUST00000211922 111 ntBASIC12.3□□□□□ -0.44
VclQ64727 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
VclQ64727 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC12.3□□□□□ -0.44
VclQ64727 Gm9004-201ENSMUST00000218739 1222 ntBASIC12.3□□□□□ -0.44
VclQ64727 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.3□□□□□ -0.44
VclQ64727 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
VclQ64727 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
VclQ64727 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
VclQ64727 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
VclQ64727 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
VclQ64727 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
VclQ64727 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC12.3□□□□□ -0.44
VclQ64727 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
VclQ64727 Gm4366-201ENSMUST00000201488 1342 ntBASIC12.3□□□□□ -0.44
VclQ64727 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.3□□□□□ -0.44
VclQ64727 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
VclQ64727 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
VclQ64727 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
VclQ64727 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.3□□□□□ -0.44
VclQ64727 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
VclQ64727 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
VclQ64727 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
VclQ64727 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.3□□□□□ -0.44
VclQ64727 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
VclQ64727 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms