Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Six4Q61321 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Six4Q61321 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Six4Q61321 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Six4Q61321 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Six4Q61321 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC12.59□□□□□ -0.39
Six4Q61321 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Six4Q61321 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC12.59□□□□□ -0.39
Six4Q61321 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC12.59□□□□□ -0.39
Six4Q61321 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Six4Q61321 CT025533.2-201ENSMUST00000228715 1248 ntBASIC12.59□□□□□ -0.39
Six4Q61321 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Six4Q61321 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC12.59□□□□□ -0.39
Six4Q61321 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Six4Q61321 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Six4Q61321 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Six4Q61321 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Six4Q61321 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Six4Q61321 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Six4Q61321 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
Six4Q61321 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Six4Q61321 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
Six4Q61321 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Six4Q61321 Gm4864-201ENSMUST00000219894 1461 ntBASIC12.59□□□□□ -0.39
Six4Q61321 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
Six4Q61321 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.58□□□□□ -0.39
Six4Q61321 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.58□□□□□ -0.39
Six4Q61321 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Six4Q61321 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.39
Six4Q61321 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Six4Q61321 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Six4Q61321 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Six4Q61321 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Six4Q61321 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Six4Q61321 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Six4Q61321 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Six4Q61321 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Six4Q61321 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Six4Q61321 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Six4Q61321 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Six4Q61321 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Six4Q61321 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Six4Q61321 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Six4Q61321 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Six4Q61321 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Six4Q61321 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Six4Q61321 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Six4Q61321 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Six4Q61321 Gm14832-201ENSMUST00000121289 322 ntBASIC12.58□□□□□ -0.4
Six4Q61321 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Six4Q61321 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC12.58□□□□□ -0.4
Six4Q61321 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC12.58□□□□□ -0.4
Six4Q61321 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Six4Q61321 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Six4Q61321 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Six4Q61321 Gm38266-201ENSMUST00000194931 421 ntBASIC12.58□□□□□ -0.4
Six4Q61321 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Six4Q61321 Gm43758-201ENSMUST00000199500 367 ntBASIC12.58□□□□□ -0.4
Six4Q61321 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
Six4Q61321 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Six4Q61321 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.58□□□□□ -0.4
Six4Q61321 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Six4Q61321 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Six4Q61321 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Six4Q61321 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Six4Q61321 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Six4Q61321 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Six4Q61321 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Six4Q61321 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Six4Q61321 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
Six4Q61321 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Six4Q61321 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Six4Q61321 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Six4Q61321 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Six4Q61321 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Six4Q61321 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
Six4Q61321 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Six4Q61321 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Six4Q61321 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Six4Q61321 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Six4Q61321 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Six4Q61321 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Six4Q61321 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Six4Q61321 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Six4Q61321 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Six4Q61321 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC12.57□□□□□ -0.4
Six4Q61321 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Six4Q61321 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Six4Q61321 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Six4Q61321 Gm28882-201ENSMUST00000185504 314 ntBASIC12.57□□□□□ -0.4
Six4Q61321 Gm44958-201ENSMUST00000203734 736 ntBASIC12.57□□□□□ -0.4
Six4Q61321 Gm21769-201ENSMUST00000211922 111 ntBASIC12.57□□□□□ -0.4
Six4Q61321 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Six4Q61321 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Six4Q61321 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Six4Q61321 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Six4Q61321 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Six4Q61321 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Six4Q61321 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Six4Q61321 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms