Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Gm8701-201ENSMUST00000169259 874 ntBASIC13.69□□□□□ -0.22
Col11a1Q61245 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Col11a1Q61245 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC13.69□□□□□ -0.22
Col11a1Q61245 Gm7504-201ENSMUST00000201449 424 ntBASIC13.69□□□□□ -0.22
Col11a1Q61245 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
Col11a1Q61245 Gm44882-201ENSMUST00000205702 802 ntBASIC13.69□□□□□ -0.22
Col11a1Q61245 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col11a1Q61245 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col11a1Q61245 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col11a1Q61245 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Col11a1Q61245 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Col11a1Q61245 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col11a1Q61245 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col11a1Q61245 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col11a1Q61245 4930465M20Rik-201ENSMUST00000130564 1446 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Col11a1Q61245 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Col11a1Q61245 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col11a1Q61245 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col11a1Q61245 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC13.68□□□□□ -0.22
Col11a1Q61245 Gm3052-202ENSMUST00000188254 2224 ntBASIC13.68□□□□□ -0.22
Col11a1Q61245 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col11a1Q61245 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Col11a1Q61245 Atp6v1g2-202ENSMUST00000118384 483 ntTSL 2 BASIC13.68□□□□□ -0.22
Col11a1Q61245 Gm15615-201ENSMUST00000118876 198 ntBASIC13.68□□□□□ -0.22
Col11a1Q61245 Gm9136-201ENSMUST00000193368 454 ntBASIC13.68□□□□□ -0.22
Col11a1Q61245 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col11a1Q61245 Gm4811-201ENSMUST00000220879 1220 ntBASIC13.68□□□□□ -0.22
Col11a1Q61245 Arhgef33-207ENSMUST00000224966 490 ntBASIC13.68□□□□□ -0.22
Col11a1Q61245 Gm16380-201ENSMUST00000077997 478 ntBASIC13.68□□□□□ -0.22
Col11a1Q61245 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col11a1Q61245 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC13.68□□□□□ -0.22
Col11a1Q61245 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col11a1Q61245 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col11a1Q61245 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Col11a1Q61245 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col11a1Q61245 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col11a1Q61245 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col11a1Q61245 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col11a1Q61245 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col11a1Q61245 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col11a1Q61245 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col11a1Q61245 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Col11a1Q61245 Gm12783-201ENSMUST00000121425 397 ntBASIC13.67□□□□□ -0.22
Col11a1Q61245 Gm4034-201ENSMUST00000187674 480 ntBASIC13.67□□□□□ -0.22
Col11a1Q61245 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Col11a1Q61245 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC13.67□□□□□ -0.22
Col11a1Q61245 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC13.67□□□□□ -0.22
Col11a1Q61245 Gm42779-201ENSMUST00000198807 406 ntBASIC13.67□□□□□ -0.22
Col11a1Q61245 AC153962.2-201ENSMUST00000219417 550 ntBASIC13.67□□□□□ -0.22
Col11a1Q61245 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col11a1Q61245 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col11a1Q61245 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
Col11a1Q61245 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col11a1Q61245 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col11a1Q61245 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col11a1Q61245 Gm45706-201ENSMUST00000213063 2136 ntBASIC13.67□□□□□ -0.22
Col11a1Q61245 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col11a1Q61245 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.67□□□□□ -0.22
Col11a1Q61245 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col11a1Q61245 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col11a1Q61245 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col11a1Q61245 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col11a1Q61245 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Col11a1Q61245 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col11a1Q61245 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col11a1Q61245 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col11a1Q61245 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Col11a1Q61245 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC13.67□□□□□ -0.22
Col11a1Q61245 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col11a1Q61245 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC13.67□□□□□ -0.22
Col11a1Q61245 Gm18776-201ENSMUST00000188833 654 ntBASIC13.67□□□□□ -0.22
Col11a1Q61245 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC13.67□□□□□ -0.22
Col11a1Q61245 Gm3318-201ENSMUST00000217604 1183 ntBASIC13.67□□□□□ -0.22
Col11a1Q61245 Gm37513-201ENSMUST00000194830 2268 ntBASIC13.66□□□□□ -0.22
Col11a1Q61245 Gm38378-201ENSMUST00000195153 2268 ntBASIC13.66□□□□□ -0.22
Col11a1Q61245 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col11a1Q61245 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Col11a1Q61245 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Col11a1Q61245 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Col11a1Q61245 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col11a1Q61245 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col11a1Q61245 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col11a1Q61245 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col11a1Q61245 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col11a1Q61245 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col11a1Q61245 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col11a1Q61245 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Col11a1Q61245 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col11a1Q61245 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col11a1Q61245 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col11a1Q61245 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col11a1Q61245 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col11a1Q61245 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.66□□□□□ -0.22
Col11a1Q61245 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
Col11a1Q61245 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Col11a1Q61245 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col11a1Q61245 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Col11a1Q61245 Gm13351-201ENSMUST00000118087 414 ntBASIC13.66□□□□□ -0.22
Col11a1Q61245 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC13.66□□□□□ -0.22
Col11a1Q61245 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms