Protein–RNA interactions for Protein: Q61045

Sim1, Single-minded homolog 1, mousemouse

Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sim1Q61045 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sim1Q61045 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sim1Q61045 Gm13813-201ENSMUST00000120998 787 ntBASIC12.42□□□□□ -0.42
Sim1Q61045 n-R5s14-201ENSMUST00000122688 107 ntBASIC12.42□□□□□ -0.42
Sim1Q61045 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sim1Q61045 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sim1Q61045 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC12.42□□□□□ -0.42
Sim1Q61045 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC12.42□□□□□ -0.42
Sim1Q61045 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.42□□□□□ -0.42
Sim1Q61045 Gm7467-201ENSMUST00000185173 652 ntBASIC12.42□□□□□ -0.42
Sim1Q61045 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sim1Q61045 Gm10702-201ENSMUST00000098929 1268 ntBASIC12.42□□□□□ -0.42
Sim1Q61045 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Sim1Q61045 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sim1Q61045 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sim1Q61045 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Sim1Q61045 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sim1Q61045 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sim1Q61045 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.42□□□□□ -0.42
Sim1Q61045 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
Sim1Q61045 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sim1Q61045 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sim1Q61045 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Sim1Q61045 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Sim1Q61045 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sim1Q61045 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sim1Q61045 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sim1Q61045 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC12.42□□□□□ -0.42
Sim1Q61045 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sim1Q61045 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.41□□□□□ -0.42
Sim1Q61045 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sim1Q61045 Gm4366-201ENSMUST00000201488 1342 ntBASIC12.41□□□□□ -0.42
Sim1Q61045 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sim1Q61045 Gm44775-201ENSMUST00000207266 1456 ntBASIC12.41□□□□□ -0.42
Sim1Q61045 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sim1Q61045 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sim1Q61045 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sim1Q61045 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
Sim1Q61045 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sim1Q61045 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sim1Q61045 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sim1Q61045 Gm13611-201ENSMUST00000118269 318 ntBASIC12.41□□□□□ -0.42
Sim1Q61045 Gm14109-201ENSMUST00000118814 309 ntBASIC12.41□□□□□ -0.42
Sim1Q61045 Gm4760-201ENSMUST00000119663 1030 ntBASIC12.41□□□□□ -0.42
Sim1Q61045 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC12.41□□□□□ -0.42
Sim1Q61045 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC12.41□□□□□ -0.42
Sim1Q61045 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC12.41□□□□□ -0.42
Sim1Q61045 Gm5597-201ENSMUST00000182353 1193 ntBASIC12.41□□□□□ -0.42
Sim1Q61045 Gm27438-201ENSMUST00000183480 110 ntBASIC12.41□□□□□ -0.42
Sim1Q61045 Gm3096-201ENSMUST00000185770 364 ntBASIC12.41□□□□□ -0.42
Sim1Q61045 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC12.41□□□□□ -0.42
Sim1Q61045 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC12.41□□□□□ -0.42
Sim1Q61045 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC12.41□□□□□ -0.42
Sim1Q61045 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sim1Q61045 CT025694.1-201ENSMUST00000226188 934 ntBASIC12.41□□□□□ -0.42
Sim1Q61045 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sim1Q61045 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sim1Q61045 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Sim1Q61045 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sim1Q61045 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sim1Q61045 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sim1Q61045 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.41□□□□□ -0.42
Sim1Q61045 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Sim1Q61045 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.41□□□□□ -0.42
Sim1Q61045 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sim1Q61045 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sim1Q61045 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sim1Q61045 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Sim1Q61045 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sim1Q61045 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sim1Q61045 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sim1Q61045 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sim1Q61045 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sim1Q61045 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Sim1Q61045 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sim1Q61045 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sim1Q61045 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sim1Q61045 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.4□□□□□ -0.42
Sim1Q61045 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.4□□□□□ -0.42
Sim1Q61045 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sim1Q61045 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC12.4□□□□□ -0.42
Sim1Q61045 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sim1Q61045 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sim1Q61045 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sim1Q61045 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sim1Q61045 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sim1Q61045 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sim1Q61045 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sim1Q61045 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sim1Q61045 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sim1Q61045 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sim1Q61045 Gm23200-201ENSMUST00000104379 132 ntBASIC12.4□□□□□ -0.42
Sim1Q61045 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC12.4□□□□□ -0.42
Sim1Q61045 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sim1Q61045 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.4□□□□□ -0.42
Sim1Q61045 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC12.4□□□□□ -0.42
Sim1Q61045 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sim1Q61045 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC12.4□□□□□ -0.42
Sim1Q61045 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC12.4□□□□□ -0.42
Sim1Q61045 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms