Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col12a1Q60847 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Col12a1Q60847 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col12a1Q60847 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC12□□□□□ -0.49
Col12a1Q60847 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Col12a1Q60847 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Col12a1Q60847 Gm14892-201ENSMUST00000117636 267 ntBASIC12□□□□□ -0.49
Col12a1Q60847 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC12□□□□□ -0.49
Col12a1Q60847 Gm12666-201ENSMUST00000123179 764 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Col12a1Q60847 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC12□□□□□ -0.49
Col12a1Q60847 Gm24328-201ENSMUST00000175104 67 ntBASIC12□□□□□ -0.49
Col12a1Q60847 Gm20694-201ENSMUST00000176943 404 ntBASIC12□□□□□ -0.49
Col12a1Q60847 Gm37981-201ENSMUST00000194280 535 ntBASIC12□□□□□ -0.49
Col12a1Q60847 Ighv1-2-201ENSMUST00000195325 378 ntBASIC12□□□□□ -0.49
Col12a1Q60847 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Col12a1Q60847 Gm46224-201ENSMUST00000220221 1242 ntTSL 1 (best) BASIC12□□□□□ -0.49
Col12a1Q60847 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC12□□□□□ -0.49
Col12a1Q60847 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col12a1Q60847 Creb3l4-201ENSMUST00000029547 1553 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col12a1Q60847 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col12a1Q60847 Gm43334-201ENSMUST00000197740 1318 ntBASIC12□□□□□ -0.49
Col12a1Q60847 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col12a1Q60847 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col12a1Q60847 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col12a1Q60847 Fam114a2-202ENSMUST00000108850 1765 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Col12a1Q60847 Grk3-204ENSMUST00000197888 1938 ntTSL 1 (best) BASIC12□□□□□ -0.49
Col12a1Q60847 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Col12a1Q60847 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Col12a1Q60847 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12□□□□□ -0.49
Col12a1Q60847 Gm12000-201ENSMUST00000132007 629 ntTSL 1 (best) BASIC12□□□□□ -0.49
Col12a1Q60847 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
Col12a1Q60847 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC12□□□□□ -0.49
Col12a1Q60847 Gm39397-201ENSMUST00000212331 228 ntTSL 5 BASIC12□□□□□ -0.49
Col12a1Q60847 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col12a1Q60847 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col12a1Q60847 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col12a1Q60847 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col12a1Q60847 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12□□□□□ -0.49
Col12a1Q60847 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col12a1Q60847 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12□□□□□ -0.49
Col12a1Q60847 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col12a1Q60847 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12□□□□□ -0.49
Col12a1Q60847 Moxd2-201ENSMUST00000031937 1860 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col12a1Q60847 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col12a1Q60847 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Col12a1Q60847 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Col12a1Q60847 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Col12a1Q60847 AC154262.2-201ENSMUST00000224310 2293 ntBASIC12□□□□□ -0.49
Col12a1Q60847 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Col12a1Q60847 Gm12906-201ENSMUST00000154610 441 ntBASIC12□□□□□ -0.49
Col12a1Q60847 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC12□□□□□ -0.49
Col12a1Q60847 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC12□□□□□ -0.49
Col12a1Q60847 Gm8197-202ENSMUST00000193422 934 ntBASIC12□□□□□ -0.49
Col12a1Q60847 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Col12a1Q60847 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col12a1Q60847 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col12a1Q60847 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col12a1Q60847 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Col12a1Q60847 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Col12a1Q60847 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col12a1Q60847 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Col12a1Q60847 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col12a1Q60847 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col12a1Q60847 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col12a1Q60847 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col12a1Q60847 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Col12a1Q60847 Pitpnm2os2-201ENSMUST00000159053 828 ntTSL 2 BASIC11.99□□□□□ -0.49
Col12a1Q60847 AC238811.4-201ENSMUST00000178019 1246 ntBASIC11.99□□□□□ -0.49
Col12a1Q60847 AC238940.3-201ENSMUST00000178830 1246 ntBASIC11.99□□□□□ -0.49
Col12a1Q60847 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC11.99□□□□□ -0.49
Col12a1Q60847 Elob-201ENSMUST00000069579 508 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col12a1Q60847 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col12a1Q60847 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col12a1Q60847 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col12a1Q60847 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC11.99□□□□□ -0.49
Col12a1Q60847 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col12a1Q60847 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col12a1Q60847 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC11.99□□□□□ -0.49
Col12a1Q60847 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Col12a1Q60847 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col12a1Q60847 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Col12a1Q60847 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col12a1Q60847 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col12a1Q60847 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col12a1Q60847 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col12a1Q60847 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Col12a1Q60847 Gm15004-201ENSMUST00000119192 630 ntBASIC11.99□□□□□ -0.49
Col12a1Q60847 Gm12681-201ENSMUST00000132337 700 ntTSL 3 BASIC11.99□□□□□ -0.49
Col12a1Q60847 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC11.99□□□□□ -0.49
Col12a1Q60847 Pfdn5-203ENSMUST00000165671 830 ntTSL 2 BASIC11.99□□□□□ -0.49
Col12a1Q60847 Mir3060-201ENSMUST00000175339 83 ntBASIC11.99□□□□□ -0.49
Col12a1Q60847 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC11.99□□□□□ -0.49
Col12a1Q60847 Gm5714-201ENSMUST00000197343 566 ntBASIC11.99□□□□□ -0.49
Col12a1Q60847 Gm7192-201ENSMUST00000210793 1137 ntBASIC11.99□□□□□ -0.49
Col12a1Q60847 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col12a1Q60847 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col12a1Q60847 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col12a1Q60847 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col12a1Q60847 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Col12a1Q60847 Gm10152-201ENSMUST00000193475 1344 ntBASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms