Protein–RNA interactions for Protein: Q60688

Foxd4, Forkhead box protein D4, mousemouse

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd4Q60688 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Foxd4Q60688 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Foxd4Q60688 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
Foxd4Q60688 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Foxd4Q60688 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Foxd4Q60688 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Foxd4Q60688 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Foxd4Q60688 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Foxd4Q60688 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Foxd4Q60688 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Foxd4Q60688 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Foxd4Q60688 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Foxd4Q60688 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Foxd4Q60688 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC13.21□□□□□ -0.3
Foxd4Q60688 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Foxd4Q60688 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Foxd4Q60688 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Foxd4Q60688 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Foxd4Q60688 Gm44241-201ENSMUST00000203230 1662 ntBASIC13.21□□□□□ -0.3
Foxd4Q60688 Gm7961-201ENSMUST00000201338 1436 ntBASIC13.21□□□□□ -0.3
Foxd4Q60688 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Foxd4Q60688 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Foxd4Q60688 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Foxd4Q60688 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Foxd4Q60688 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Foxd4Q60688 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Foxd4Q60688 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Foxd4Q60688 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Foxd4Q60688 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Foxd4Q60688 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Foxd4Q60688 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC13.2□□□□□ -0.3
Foxd4Q60688 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Foxd4Q60688 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Foxd4Q60688 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Foxd4Q60688 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Foxd4Q60688 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Foxd4Q60688 Hbp1-206ENSMUST00000176103 1319 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Foxd4Q60688 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Foxd4Q60688 AC116503.1-201ENSMUST00000215445 2192 ntBASIC13.2□□□□□ -0.3
Foxd4Q60688 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Foxd4Q60688 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
Foxd4Q60688 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC13.2□□□□□ -0.3
Foxd4Q60688 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Foxd4Q60688 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Foxd4Q60688 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC13.2□□□□□ -0.3
Foxd4Q60688 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Foxd4Q60688 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Foxd4Q60688 Gm14743-201ENSMUST00000114026 759 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Foxd4Q60688 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Foxd4Q60688 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Foxd4Q60688 Mup-ps15-201ENSMUST00000121741 539 ntBASIC13.2□□□□□ -0.3
Foxd4Q60688 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC13.2□□□□□ -0.3
Foxd4Q60688 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Foxd4Q60688 Samd13-204ENSMUST00000147113 729 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Foxd4Q60688 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC13.2□□□□□ -0.3
Foxd4Q60688 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC13.2□□□□□ -0.3
Foxd4Q60688 Gm16147-201ENSMUST00000162143 373 ntBASIC13.2□□□□□ -0.3
Foxd4Q60688 Prl5a1-201ENSMUST00000017208 1061 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Foxd4Q60688 1700121L03Rik-201ENSMUST00000187796 704 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Foxd4Q60688 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Foxd4Q60688 Gm37468-201ENSMUST00000194767 854 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Foxd4Q60688 AC153816.1-201ENSMUST00000217870 764 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Foxd4Q60688 Gm18041-201ENSMUST00000218210 618 ntBASIC13.2□□□□□ -0.3
Foxd4Q60688 AC155286.1-201ENSMUST00000218632 448 ntBASIC13.2□□□□□ -0.3
Foxd4Q60688 4930466K18Rik-201ENSMUST00000219458 906 ntBASIC13.2□□□□□ -0.3
Foxd4Q60688 AC158981.3-201ENSMUST00000226844 1024 ntBASIC13.2□□□□□ -0.3
Foxd4Q60688 Vmn1r67-201ENSMUST00000055964 999 ntAPPRIS P2 BASIC13.2□□□□□ -0.3
Foxd4Q60688 Gm24447-201ENSMUST00000083977 338 ntBASIC13.2□□□□□ -0.3
Foxd4Q60688 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Foxd4Q60688 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Foxd4Q60688 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Foxd4Q60688 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Foxd4Q60688 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Foxd4Q60688 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Foxd4Q60688 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Foxd4Q60688 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Foxd4Q60688 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Foxd4Q60688 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Foxd4Q60688 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Foxd4Q60688 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Foxd4Q60688 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Foxd4Q60688 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Foxd4Q60688 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Foxd4Q60688 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Foxd4Q60688 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Foxd4Q60688 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC13.2□□□□□ -0.3
Foxd4Q60688 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Foxd4Q60688 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Foxd4Q60688 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Foxd4Q60688 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC13.19□□□□□ -0.3
Foxd4Q60688 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Foxd4Q60688 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Foxd4Q60688 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Foxd4Q60688 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Foxd4Q60688 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Foxd4Q60688 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Foxd4Q60688 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC13.19□□□□□ -0.3
Foxd4Q60688 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC13.19□□□□□ -0.3
Foxd4Q60688 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Foxd4Q60688 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms