Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Trav3-3Q5R1C3 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav3-3Q5R1C3 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Trav3-3Q5R1C3 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC9.39□□□□□ -0.91
Trav3-3Q5R1C3 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Trav3-3Q5R1C3 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav3-3Q5R1C3 Cox17-202ENSMUST00000120495 3690 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav3-3Q5R1C3 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav3-3Q5R1C3 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav3-3Q5R1C3 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav3-3Q5R1C3 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav3-3Q5R1C3 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav3-3Q5R1C3 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC9.38□□□□□ -0.91
Trav3-3Q5R1C3 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav3-3Q5R1C3 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav3-3Q5R1C3 Gm26631-201ENSMUST00000181462 2505 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Trav3-3Q5R1C3 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav3-3Q5R1C3 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav3-3Q5R1C3 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav3-3Q5R1C3 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav3-3Q5R1C3 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Trav3-3Q5R1C3 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav3-3Q5R1C3 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav3-3Q5R1C3 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav3-3Q5R1C3 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav3-3Q5R1C3 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Trav3-3Q5R1C3 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Trav3-3Q5R1C3 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC9.38□□□□□ -0.91
Trav3-3Q5R1C3 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Trav3-3Q5R1C3 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC9.38□□□□□ -0.91
Trav3-3Q5R1C3 Gm13365-201ENSMUST00000121188 973 ntBASIC9.38□□□□□ -0.91
Trav3-3Q5R1C3 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC9.38□□□□□ -0.91
Trav3-3Q5R1C3 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Trav3-3Q5R1C3 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Trav3-3Q5R1C3 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC9.38□□□□□ -0.91
Trav3-3Q5R1C3 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC9.38□□□□□ -0.91
Trav3-3Q5R1C3 Gm24420-201ENSMUST00000176676 59 ntBASIC9.38□□□□□ -0.91
Trav3-3Q5R1C3 Gm6283-201ENSMUST00000182369 1000 ntBASIC9.38□□□□□ -0.91
Trav3-3Q5R1C3 Gm18766-201ENSMUST00000189811 808 ntBASIC9.38□□□□□ -0.91
Trav3-3Q5R1C3 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Trav3-3Q5R1C3 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Trav3-3Q5R1C3 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav3-3Q5R1C3 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav3-3Q5R1C3 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Trav3-3Q5R1C3 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav3-3Q5R1C3 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Trav3-3Q5R1C3 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Trav3-3Q5R1C3 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Trav3-3Q5R1C3 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Trav3-3Q5R1C3 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav3-3Q5R1C3 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav3-3Q5R1C3 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav3-3Q5R1C3 Gm42840-201ENSMUST00000200303 2251 ntBASIC9.38□□□□□ -0.91
Trav3-3Q5R1C3 AC159196.2-201ENSMUST00000224082 1622 ntBASIC9.38□□□□□ -0.91
Trav3-3Q5R1C3 Nek4-207ENSMUST00000228328 4245 ntAPPRIS P2 BASIC9.38□□□□□ -0.91
Trav3-3Q5R1C3 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav3-3Q5R1C3 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav3-3Q5R1C3 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav3-3Q5R1C3 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Trav3-3Q5R1C3 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Trav3-3Q5R1C3 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Trav3-3Q5R1C3 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Trav3-3Q5R1C3 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav3-3Q5R1C3 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav3-3Q5R1C3 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav3-3Q5R1C3 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Trav3-3Q5R1C3 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav3-3Q5R1C3 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Trav3-3Q5R1C3 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav3-3Q5R1C3 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav3-3Q5R1C3 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Trav3-3Q5R1C3 Tnfrsf9-205ENSMUST00000116257 2115 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav3-3Q5R1C3 Nufip2-204ENSMUST00000181023 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav3-3Q5R1C3 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav3-3Q5R1C3 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav3-3Q5R1C3 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Trav3-3Q5R1C3 Ddah1-202ENSMUST00000120310 2291 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Trav3-3Q5R1C3 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Trav3-3Q5R1C3 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC9.37□□□□□ -0.91
Trav3-3Q5R1C3 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC9.37□□□□□ -0.91
Trav3-3Q5R1C3 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC9.37□□□□□ -0.91
Trav3-3Q5R1C3 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC9.37□□□□□ -0.91
Trav3-3Q5R1C3 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC9.37□□□□□ -0.91
Trav3-3Q5R1C3 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Trav3-3Q5R1C3 Gm21470-201ENSMUST00000187680 696 ntBASIC9.37□□□□□ -0.91
Trav3-3Q5R1C3 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Trav3-3Q5R1C3 Gm6916-202ENSMUST00000205523 195 ntBASIC9.37□□□□□ -0.91
Trav3-3Q5R1C3 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Trav3-3Q5R1C3 Gm9229-201ENSMUST00000222777 126 ntBASIC9.37□□□□□ -0.91
Trav3-3Q5R1C3 Gm8227-201ENSMUST00000223306 571 ntBASIC9.37□□□□□ -0.91
Trav3-3Q5R1C3 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav3-3Q5R1C3 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav3-3Q5R1C3 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav3-3Q5R1C3 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav3-3Q5R1C3 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav3-3Q5R1C3 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Trav3-3Q5R1C3 Gm6092-201ENSMUST00000121659 2029 ntBASIC9.37□□□□□ -0.91
Trav3-3Q5R1C3 Ttll7-205ENSMUST00000170055 6075 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Trav3-3Q5R1C3 Olfr463-202ENSMUST00000215150 2031 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Trav3-3Q5R1C3 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC9.37□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms