Protein–RNA interactions for Protein: Q3ULF4

Spg7, Paraplegin, mousemouse

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg7Q3ULF4 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Spg7Q3ULF4 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC14.85□□□□□ -0.03
Spg7Q3ULF4 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Spg7Q3ULF4 Gm34767-201ENSMUST00000191813 1062 ntBASIC14.85□□□□□ -0.03
Spg7Q3ULF4 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC14.85□□□□□ -0.03
Spg7Q3ULF4 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Spg7Q3ULF4 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Spg7Q3ULF4 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Spg7Q3ULF4 Gm6210-201ENSMUST00000204734 1942 ntBASIC14.85□□□□□ -0.03
Spg7Q3ULF4 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Spg7Q3ULF4 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Spg7Q3ULF4 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Spg7Q3ULF4 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Spg7Q3ULF4 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Spg7Q3ULF4 Gm42863-201ENSMUST00000197875 2958 ntBASIC14.85□□□□□ -0.03
Spg7Q3ULF4 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Spg7Q3ULF4 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Spg7Q3ULF4 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Spg7Q3ULF4 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Spg7Q3ULF4 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Spg7Q3ULF4 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Spg7Q3ULF4 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Spg7Q3ULF4 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Spg7Q3ULF4 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC14.84□□□□□ -0.03
Spg7Q3ULF4 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Spg7Q3ULF4 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Spg7Q3ULF4 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Spg7Q3ULF4 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Spg7Q3ULF4 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Spg7Q3ULF4 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Spg7Q3ULF4 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Spg7Q3ULF4 Gm15711-201ENSMUST00000118889 535 ntBASIC14.84□□□□□ -0.03
Spg7Q3ULF4 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
Spg7Q3ULF4 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Spg7Q3ULF4 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC14.84□□□□□ -0.03
Spg7Q3ULF4 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC14.84□□□□□ -0.03
Spg7Q3ULF4 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC14.84□□□□□ -0.03
Spg7Q3ULF4 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Spg7Q3ULF4 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC14.84□□□□□ -0.03
Spg7Q3ULF4 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Spg7Q3ULF4 Gm42997-202ENSMUST00000200321 985 ntBASIC14.84□□□□□ -0.03
Spg7Q3ULF4 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC14.84□□□□□ -0.03
Spg7Q3ULF4 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Spg7Q3ULF4 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Spg7Q3ULF4 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Spg7Q3ULF4 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Spg7Q3ULF4 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Spg7Q3ULF4 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Spg7Q3ULF4 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Spg7Q3ULF4 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Spg7Q3ULF4 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Spg7Q3ULF4 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Spg7Q3ULF4 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Spg7Q3ULF4 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Spg7Q3ULF4 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Spg7Q3ULF4 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
Spg7Q3ULF4 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Spg7Q3ULF4 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Spg7Q3ULF4 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.03
Spg7Q3ULF4 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Spg7Q3ULF4 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Spg7Q3ULF4 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Spg7Q3ULF4 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Spg7Q3ULF4 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Spg7Q3ULF4 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Spg7Q3ULF4 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Spg7Q3ULF4 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Spg7Q3ULF4 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Spg7Q3ULF4 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Spg7Q3ULF4 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Spg7Q3ULF4 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Spg7Q3ULF4 Gm12380-201ENSMUST00000119012 544 ntBASIC14.83□□□□□ -0.04
Spg7Q3ULF4 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC14.83□□□□□ -0.04
Spg7Q3ULF4 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC14.83□□□□□ -0.04
Spg7Q3ULF4 AU022133-201ENSMUST00000200601 873 ntBASIC14.83□□□□□ -0.04
Spg7Q3ULF4 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Spg7Q3ULF4 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Spg7Q3ULF4 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Spg7Q3ULF4 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Spg7Q3ULF4 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
Spg7Q3ULF4 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC14.83□□□□□ -0.04
Spg7Q3ULF4 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Spg7Q3ULF4 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC14.83□□□□□ -0.04
Spg7Q3ULF4 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Spg7Q3ULF4 Gm4735-201ENSMUST00000138679 1302 ntBASIC14.83□□□□□ -0.04
Spg7Q3ULF4 Gm5855-201ENSMUST00000200240 1305 ntBASIC14.83□□□□□ -0.04
Spg7Q3ULF4 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Spg7Q3ULF4 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Spg7Q3ULF4 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Spg7Q3ULF4 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Spg7Q3ULF4 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC14.83□□□□□ -0.04
Spg7Q3ULF4 Gm45706-201ENSMUST00000213063 2136 ntBASIC14.83□□□□□ -0.04
Spg7Q3ULF4 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Spg7Q3ULF4 Gm18227-201ENSMUST00000211082 1468 ntBASIC14.82□□□□□ -0.04
Spg7Q3ULF4 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Spg7Q3ULF4 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Spg7Q3ULF4 Gm43721-201ENSMUST00000199677 2313 ntBASIC14.82□□□□□ -0.04
Spg7Q3ULF4 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC14.82□□□□□ -0.04
Spg7Q3ULF4 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Spg7Q3ULF4 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms