Protein–RNA interactions for Protein: Q3UHJ8

Rnf44, RING finger protein 44, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf44Q3UHJ8 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf44Q3UHJ8 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Rnf44Q3UHJ8 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf44Q3UHJ8 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf44Q3UHJ8 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Rnf44Q3UHJ8 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf44Q3UHJ8 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.06□□□□□ -0.48
Rnf44Q3UHJ8 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf44Q3UHJ8 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Rnf44Q3UHJ8 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf44Q3UHJ8 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf44Q3UHJ8 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Rnf44Q3UHJ8 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Rnf44Q3UHJ8 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf44Q3UHJ8 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf44Q3UHJ8 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf44Q3UHJ8 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf44Q3UHJ8 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Rnf44Q3UHJ8 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf44Q3UHJ8 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.05□□□□□ -0.48
Rnf44Q3UHJ8 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf44Q3UHJ8 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Rnf44Q3UHJ8 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf44Q3UHJ8 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf44Q3UHJ8 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf44Q3UHJ8 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf44Q3UHJ8 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf44Q3UHJ8 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Rnf44Q3UHJ8 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf44Q3UHJ8 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Rnf44Q3UHJ8 Gm5637-201ENSMUST00000153890 1119 ntBASIC12.05□□□□□ -0.48
Rnf44Q3UHJ8 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
Rnf44Q3UHJ8 Gm27023-201ENSMUST00000182372 285 ntBASIC12.05□□□□□ -0.48
Rnf44Q3UHJ8 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12.05□□□□□ -0.48
Rnf44Q3UHJ8 Gm6621-201ENSMUST00000193251 772 ntBASIC12.05□□□□□ -0.48
Rnf44Q3UHJ8 Gm38266-201ENSMUST00000194931 421 ntBASIC12.05□□□□□ -0.48
Rnf44Q3UHJ8 Gm43179-201ENSMUST00000198797 275 ntBASIC12.05□□□□□ -0.48
Rnf44Q3UHJ8 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.05□□□□□ -0.48
Rnf44Q3UHJ8 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC12.05□□□□□ -0.48
Rnf44Q3UHJ8 Gm19963-201ENSMUST00000208413 1255 ntBASIC12.05□□□□□ -0.48
Rnf44Q3UHJ8 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.05□□□□□ -0.48
Rnf44Q3UHJ8 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf44Q3UHJ8 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC12.05□□□□□ -0.48
Rnf44Q3UHJ8 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf44Q3UHJ8 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf44Q3UHJ8 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.05□□□□□ -0.48
Rnf44Q3UHJ8 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Rnf44Q3UHJ8 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Rnf44Q3UHJ8 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf44Q3UHJ8 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Rnf44Q3UHJ8 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf44Q3UHJ8 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf44Q3UHJ8 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf44Q3UHJ8 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf44Q3UHJ8 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf44Q3UHJ8 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC12.05□□□□□ -0.48
Rnf44Q3UHJ8 Gm4735-201ENSMUST00000138679 1302 ntBASIC12.05□□□□□ -0.48
Rnf44Q3UHJ8 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.05□□□□□ -0.48
Rnf44Q3UHJ8 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.05□□□□□ -0.48
Rnf44Q3UHJ8 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf44Q3UHJ8 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf44Q3UHJ8 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf44Q3UHJ8 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf44Q3UHJ8 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Rnf44Q3UHJ8 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf44Q3UHJ8 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf44Q3UHJ8 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Rnf44Q3UHJ8 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf44Q3UHJ8 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf44Q3UHJ8 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf44Q3UHJ8 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf44Q3UHJ8 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf44Q3UHJ8 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf44Q3UHJ8 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.04□□□□□ -0.48
Rnf44Q3UHJ8 AC167669.2-201ENSMUST00000224417 1620 ntBASIC12.04□□□□□ -0.48
Rnf44Q3UHJ8 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf44Q3UHJ8 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf44Q3UHJ8 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf44Q3UHJ8 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf44Q3UHJ8 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf44Q3UHJ8 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf44Q3UHJ8 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.04□□□□□ -0.48
Rnf44Q3UHJ8 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.04□□□□□ -0.48
Rnf44Q3UHJ8 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf44Q3UHJ8 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf44Q3UHJ8 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf44Q3UHJ8 Gm25214-201ENSMUST00000104573 129 ntBASIC12.04□□□□□ -0.48
Rnf44Q3UHJ8 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf44Q3UHJ8 Gm11531-201ENSMUST00000117614 555 ntBASIC12.04□□□□□ -0.48
Rnf44Q3UHJ8 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC12.04□□□□□ -0.48
Rnf44Q3UHJ8 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC12.04□□□□□ -0.48
Rnf44Q3UHJ8 Gm2991-201ENSMUST00000173338 480 ntBASIC12.04□□□□□ -0.48
Rnf44Q3UHJ8 Gm27243-201ENSMUST00000183964 521 ntBASIC12.04□□□□□ -0.48
Rnf44Q3UHJ8 Gm6334-201ENSMUST00000207083 228 ntBASIC12.04□□□□□ -0.48
Rnf44Q3UHJ8 Gm5950-201ENSMUST00000213337 772 ntBASIC12.04□□□□□ -0.48
Rnf44Q3UHJ8 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf44Q3UHJ8 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf44Q3UHJ8 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf44Q3UHJ8 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Rnf44Q3UHJ8 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms