Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Gm8170-201ENSMUST00000218581 945 ntBASIC6.38□□□□□ -1.39
Ush2AQ2QI47 AC163638.2-201ENSMUST00000224920 827 ntBASIC6.38□□□□□ -1.39
Ush2AQ2QI47 AC122356.2-201ENSMUST00000226962 820 ntBASIC6.38□□□□□ -1.39
Ush2AQ2QI47 AC123061.1-201ENSMUST00000228021 999 ntBASIC6.38□□□□□ -1.39
Ush2AQ2QI47 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Ush2AQ2QI47 Rnasek-201ENSMUST00000040428 611 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Ush2AQ2QI47 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Ush2AQ2QI47 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
Ush2AQ2QI47 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Ush2AQ2QI47 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC6.38□□□□□ -1.39
Ush2AQ2QI47 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Ush2AQ2QI47 Cd247-202ENSMUST00000027849 1317 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Ush2AQ2QI47 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Ush2AQ2QI47 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Ush2AQ2QI47 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC6.38□□□□□ -1.39
Ush2AQ2QI47 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Ush2AQ2QI47 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Ush2AQ2QI47 8430423G03Rik-201ENSMUST00000110507 639 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Ush2AQ2QI47 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Ush2AQ2QI47 Gm15720-201ENSMUST00000117133 282 ntBASIC6.38□□□□□ -1.39
Ush2AQ2QI47 Gm15615-201ENSMUST00000118876 198 ntBASIC6.38□□□□□ -1.39
Ush2AQ2QI47 Gm7928-201ENSMUST00000181249 701 ntBASIC6.38□□□□□ -1.39
Ush2AQ2QI47 AI506816-201ENSMUST00000197153 474 ntTSL 5 BASIC6.38□□□□□ -1.39
Ush2AQ2QI47 Cenpn-205ENSMUST00000212775 837 ntTSL 3 BASIC6.38□□□□□ -1.39
Ush2AQ2QI47 CT010506.1-201ENSMUST00000223673 349 ntBASIC6.38□□□□□ -1.39
Ush2AQ2QI47 Stard3nl-205ENSMUST00000197565 1391 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Ush2AQ2QI47 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Ush2AQ2QI47 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Ush2AQ2QI47 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
Ush2AQ2QI47 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Ush2AQ2QI47 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Ush2AQ2QI47 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Ush2AQ2QI47 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Ush2AQ2QI47 Ino80dos-201ENSMUST00000138611 1576 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Ush2AQ2QI47 Tpi1-203ENSMUST00000149610 802 ntTSL 2 BASIC6.38□□□□□ -1.39
Ush2AQ2QI47 Gm13412-201ENSMUST00000150621 677 ntTSL 3 BASIC6.38□□□□□ -1.39
Ush2AQ2QI47 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Ush2AQ2QI47 Gm18164-201ENSMUST00000213769 927 ntBASIC6.38□□□□□ -1.39
Ush2AQ2QI47 Gm18166-201ENSMUST00000215557 927 ntBASIC6.38□□□□□ -1.39
Ush2AQ2QI47 Mptx1-201ENSMUST00000027816 799 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Ush2AQ2QI47 Rpl37-201ENSMUST00000045356 835 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Ush2AQ2QI47 4930553M12Rik-201ENSMUST00000057837 498 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Ush2AQ2QI47 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Ush2AQ2QI47 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Ush2AQ2QI47 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Ush2AQ2QI47 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Ush2AQ2QI47 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC6.38□□□□□ -1.39
Ush2AQ2QI47 AC110091.3-201ENSMUST00000213406 1304 ntTSL 5 BASIC6.38□□□□□ -1.39
Ush2AQ2QI47 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Ush2AQ2QI47 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Ush2AQ2QI47 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Ush2AQ2QI47 E030025P04Rik-201ENSMUST00000106710 1078 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Ush2AQ2QI47 Styxl1-203ENSMUST00000111162 726 ntTSL 5 BASIC6.37□□□□□ -1.39
Ush2AQ2QI47 Rpl7a-ps11-201ENSMUST00000118791 801 ntBASIC6.37□□□□□ -1.39
Ush2AQ2QI47 Gm15207-201ENSMUST00000119259 442 ntBASIC6.37□□□□□ -1.39
Ush2AQ2QI47 Gm24140-201ENSMUST00000122773 326 ntBASIC6.37□□□□□ -1.39
Ush2AQ2QI47 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Ush2AQ2QI47 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Ush2AQ2QI47 2410002F23Rik-220ENSMUST00000191537 872 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
Ush2AQ2QI47 Gm37009-201ENSMUST00000193297 361 ntBASIC6.37□□□□□ -1.39
Ush2AQ2QI47 AC153153.1-201ENSMUST00000225803 793 ntBASIC6.37□□□□□ -1.39
Ush2AQ2QI47 AC093022.5-201ENSMUST00000226841 1079 ntBASIC6.37□□□□□ -1.39
Ush2AQ2QI47 Gm16477-201ENSMUST00000085365 801 ntBASIC6.37□□□□□ -1.39
Ush2AQ2QI47 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Ush2AQ2QI47 Gm17415-201ENSMUST00000096427 789 ntBASIC6.37□□□□□ -1.39
Ush2AQ2QI47 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Ush2AQ2QI47 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC6.37□□□□□ -1.39
Ush2AQ2QI47 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Ush2AQ2QI47 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Ush2AQ2QI47 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Ush2AQ2QI47 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Ush2AQ2QI47 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Ush2AQ2QI47 Gm6560-201ENSMUST00000198588 1591 ntBASIC6.37□□□□□ -1.39
Ush2AQ2QI47 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Ush2AQ2QI47 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
Ush2AQ2QI47 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Ush2AQ2QI47 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Ush2AQ2QI47 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Ush2AQ2QI47 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Ush2AQ2QI47 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Ush2AQ2QI47 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Ush2AQ2QI47 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Ush2AQ2QI47 Vmn2r-ps125-201ENSMUST00000176234 931 ntBASIC6.37□□□□□ -1.39
Ush2AQ2QI47 Gm3198-201ENSMUST00000208725 1026 ntBASIC6.37□□□□□ -1.39
Ush2AQ2QI47 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Ush2AQ2QI47 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Ush2AQ2QI47 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Ush2AQ2QI47 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Ush2AQ2QI47 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC6.37□□□□□ -1.39
Ush2AQ2QI47 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Ush2AQ2QI47 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Ush2AQ2QI47 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Ush2AQ2QI47 Gm44645-201ENSMUST00000205492 1653 ntBASIC6.37□□□□□ -1.39
Ush2AQ2QI47 Gm30504-201ENSMUST00000209316 1688 ntTSL 5 BASIC6.37□□□□□ -1.39
Ush2AQ2QI47 Gm12435-201ENSMUST00000118949 1016 ntBASIC6.37□□□□□ -1.39
Ush2AQ2QI47 Shf-205ENSMUST00000121237 882 ntTSL 3 BASIC6.37□□□□□ -1.39
Ush2AQ2QI47 Gm14165-201ENSMUST00000121456 952 ntBASIC6.37□□□□□ -1.39
Ush2AQ2QI47 Gm11993-201ENSMUST00000121861 820 ntBASIC6.37□□□□□ -1.39
Ush2AQ2QI47 Gm13056-201ENSMUST00000142429 564 ntTSL 2 BASIC6.37□□□□□ -1.39
Ush2AQ2QI47 Gm26379-201ENSMUST00000178125 138 ntBASIC6.37□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms