Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC12.57□□□□□ -0.4
Pfdn6Q03958 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pfdn6Q03958 Gm17150-201ENSMUST00000165577 381 ntBASIC12.57□□□□□ -0.4
Pfdn6Q03958 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.57□□□□□ -0.4
Pfdn6Q03958 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Pfdn6Q03958 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Pfdn6Q03958 Gm5904-201ENSMUST00000210286 865 ntBASIC12.57□□□□□ -0.4
Pfdn6Q03958 Gm40466-201ENSMUST00000212174 422 ntBASIC12.57□□□□□ -0.4
Pfdn6Q03958 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pfdn6Q03958 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pfdn6Q03958 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pfdn6Q03958 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pfdn6Q03958 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pfdn6Q03958 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.57□□□□□ -0.4
Pfdn6Q03958 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pfdn6Q03958 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Pfdn6Q03958 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Pfdn6Q03958 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Pfdn6Q03958 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pfdn6Q03958 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pfdn6Q03958 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Pfdn6Q03958 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Pfdn6Q03958 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Pfdn6Q03958 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pfdn6Q03958 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pfdn6Q03958 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pfdn6Q03958 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC12.57□□□□□ -0.4
Pfdn6Q03958 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.57□□□□□ -0.4
Pfdn6Q03958 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.57□□□□□ -0.4
Pfdn6Q03958 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pfdn6Q03958 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pfdn6Q03958 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pfdn6Q03958 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Pfdn6Q03958 Gm12846-201ENSMUST00000120431 1373 ntBASIC12.56□□□□□ -0.4
Pfdn6Q03958 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pfdn6Q03958 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pfdn6Q03958 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pfdn6Q03958 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pfdn6Q03958 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pfdn6Q03958 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pfdn6Q03958 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pfdn6Q03958 Gm7553-201ENSMUST00000185805 1426 ntBASIC12.56□□□□□ -0.4
Pfdn6Q03958 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Pfdn6Q03958 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Pfdn6Q03958 Snord83b-201ENSMUST00000104546 94 ntBASIC12.56□□□□□ -0.4
Pfdn6Q03958 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC12.56□□□□□ -0.4
Pfdn6Q03958 Gm16177-201ENSMUST00000120728 718 ntBASIC12.56□□□□□ -0.4
Pfdn6Q03958 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC12.56□□□□□ -0.4
Pfdn6Q03958 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pfdn6Q03958 Gm7029-201ENSMUST00000173226 450 ntBASIC12.56□□□□□ -0.4
Pfdn6Q03958 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.56□□□□□ -0.4
Pfdn6Q03958 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Pfdn6Q03958 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pfdn6Q03958 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Pfdn6Q03958 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pfdn6Q03958 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pfdn6Q03958 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pfdn6Q03958 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC12.56□□□□□ -0.4
Pfdn6Q03958 AC114008.2-201ENSMUST00000227699 1347 ntBASIC12.56□□□□□ -0.4
Pfdn6Q03958 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pfdn6Q03958 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pfdn6Q03958 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.56□□□□□ -0.4
Pfdn6Q03958 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Pfdn6Q03958 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pfdn6Q03958 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pfdn6Q03958 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Pfdn6Q03958 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pfdn6Q03958 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pfdn6Q03958 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.55□□□□□ -0.4
Pfdn6Q03958 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pfdn6Q03958 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.55□□□□□ -0.4
Pfdn6Q03958 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pfdn6Q03958 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pfdn6Q03958 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pfdn6Q03958 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pfdn6Q03958 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pfdn6Q03958 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pfdn6Q03958 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pfdn6Q03958 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pfdn6Q03958 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC12.55□□□□□ -0.4
Pfdn6Q03958 Gm12390-201ENSMUST00000117897 397 ntBASIC12.55□□□□□ -0.4
Pfdn6Q03958 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pfdn6Q03958 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pfdn6Q03958 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Pfdn6Q03958 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC12.55□□□□□ -0.4
Pfdn6Q03958 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.55□□□□□ -0.4
Pfdn6Q03958 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Pfdn6Q03958 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC12.55□□□□□ -0.4
Pfdn6Q03958 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC12.55□□□□□ -0.4
Pfdn6Q03958 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.55□□□□□ -0.4
Pfdn6Q03958 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.55□□□□□ -0.4
Pfdn6Q03958 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pfdn6Q03958 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pfdn6Q03958 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pfdn6Q03958 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Pfdn6Q03958 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.55□□□□□ -0.4
Pfdn6Q03958 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Pfdn6Q03958 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pfdn6Q03958 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Pfdn6Q03958 Gm45011-201ENSMUST00000207620 2297 ntBASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 74.3 ms