Protein–RNA interactions for Protein: P98083

Shc1, SHC-transforming protein 1, mousemouse

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shc1P98083 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC11.25□□□□□ -0.61
Shc1P98083 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC11.25□□□□□ -0.61
Shc1P98083 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC11.25□□□□□ -0.61
Shc1P98083 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Shc1P98083 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC11.25□□□□□ -0.61
Shc1P98083 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Shc1P98083 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC11.25□□□□□ -0.61
Shc1P98083 Cts7-204ENSMUST00000225321 1257 ntBASIC11.25□□□□□ -0.61
Shc1P98083 Morn2-202ENSMUST00000227729 656 ntBASIC11.25□□□□□ -0.61
Shc1P98083 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Shc1P98083 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Shc1P98083 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Shc1P98083 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Shc1P98083 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC11.25□□□□□ -0.61
Shc1P98083 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Shc1P98083 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Shc1P98083 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Shc1P98083 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Shc1P98083 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Shc1P98083 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Shc1P98083 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Shc1P98083 Gm38385-201ENSMUST00000194454 2351 ntBASIC11.25□□□□□ -0.61
Shc1P98083 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Shc1P98083 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Shc1P98083 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Shc1P98083 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shc1P98083 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Shc1P98083 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC11.24□□□□□ -0.61
Shc1P98083 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shc1P98083 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shc1P98083 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Shc1P98083 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC11.24□□□□□ -0.61
Shc1P98083 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC11.24□□□□□ -0.61
Shc1P98083 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Shc1P98083 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shc1P98083 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shc1P98083 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Shc1P98083 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC11.24□□□□□ -0.61
Shc1P98083 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Shc1P98083 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC11.24□□□□□ -0.61
Shc1P98083 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC11.24□□□□□ -0.61
Shc1P98083 Rmrp-201ENSMUST00000157463 271 ntBASIC11.24□□□□□ -0.61
Shc1P98083 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC11.24□□□□□ -0.61
Shc1P98083 Gm2991-201ENSMUST00000173338 480 ntBASIC11.24□□□□□ -0.61
Shc1P98083 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC11.24□□□□□ -0.61
Shc1P98083 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Shc1P98083 Gm6621-201ENSMUST00000193251 772 ntBASIC11.24□□□□□ -0.61
Shc1P98083 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC11.24□□□□□ -0.61
Shc1P98083 Gm19963-201ENSMUST00000208413 1255 ntBASIC11.24□□□□□ -0.61
Shc1P98083 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shc1P98083 Gm9368-201ENSMUST00000219348 831 ntBASIC11.24□□□□□ -0.61
Shc1P98083 AL732506.1-201ENSMUST00000226420 281 ntBASIC11.24□□□□□ -0.61
Shc1P98083 Gm26035-201ENSMUST00000083065 308 ntBASIC11.24□□□□□ -0.61
Shc1P98083 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Shc1P98083 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Shc1P98083 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Shc1P98083 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shc1P98083 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Shc1P98083 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Shc1P98083 Gm4366-201ENSMUST00000201488 1342 ntBASIC11.24□□□□□ -0.61
Shc1P98083 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shc1P98083 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shc1P98083 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC11.24□□□□□ -0.61
Shc1P98083 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Shc1P98083 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shc1P98083 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shc1P98083 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shc1P98083 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shc1P98083 Gm37737-201ENSMUST00000195013 1638 ntBASIC11.24□□□□□ -0.61
Shc1P98083 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC11.24□□□□□ -0.61
Shc1P98083 Gm7049-201ENSMUST00000223520 1712 ntBASIC11.23□□□□□ -0.61
Shc1P98083 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shc1P98083 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC11.23□□□□□ -0.61
Shc1P98083 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shc1P98083 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Shc1P98083 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shc1P98083 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shc1P98083 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shc1P98083 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shc1P98083 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Shc1P98083 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shc1P98083 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC11.23□□□□□ -0.61
Shc1P98083 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Shc1P98083 Gm10434-201ENSMUST00000101158 471 ntBASIC11.23□□□□□ -0.61
Shc1P98083 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Shc1P98083 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Shc1P98083 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Shc1P98083 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Shc1P98083 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Shc1P98083 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Shc1P98083 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Shc1P98083 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
Shc1P98083 Gm12241-201ENSMUST00000118330 726 ntBASIC11.23□□□□□ -0.61
Shc1P98083 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Shc1P98083 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Shc1P98083 Gm5637-201ENSMUST00000153890 1119 ntBASIC11.23□□□□□ -0.61
Shc1P98083 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shc1P98083 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC11.23□□□□□ -0.61
Shc1P98083 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC11.23□□□□□ -0.61
Shc1P98083 Gm39404-201ENSMUST00000216350 313 ntBASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 9.8 ms