Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.31□□□□□ -0.44
Shox2P70390 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Shox2P70390 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Shox2P70390 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC12.31□□□□□ -0.44
Shox2P70390 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Shox2P70390 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Shox2P70390 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.31□□□□□ -0.44
Shox2P70390 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC12.31□□□□□ -0.44
Shox2P70390 Gm5279-201ENSMUST00000199575 745 ntBASIC12.31□□□□□ -0.44
Shox2P70390 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
Shox2P70390 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Shox2P70390 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Shox2P70390 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Shox2P70390 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Shox2P70390 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Shox2P70390 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Shox2P70390 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Shox2P70390 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Shox2P70390 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Shox2P70390 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Shox2P70390 CT025681.1-201ENSMUST00000225453 1855 ntBASIC12.31□□□□□ -0.44
Shox2P70390 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC12.31□□□□□ -0.44
Shox2P70390 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Shox2P70390 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Shox2P70390 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Shox2P70390 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Shox2P70390 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Shox2P70390 Gm37931-201ENSMUST00000194686 2866 ntBASIC12.31□□□□□ -0.44
Shox2P70390 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Shox2P70390 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Shox2P70390 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Shox2P70390 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Shox2P70390 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Shox2P70390 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Shox2P70390 AC159195.3-201ENSMUST00000225162 2211 ntBASIC12.3□□□□□ -0.44
Shox2P70390 AC138329.2-201ENSMUST00000225579 1842 ntBASIC12.3□□□□□ -0.44
Shox2P70390 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Shox2P70390 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Shox2P70390 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Shox2P70390 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC12.3□□□□□ -0.44
Shox2P70390 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Shox2P70390 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Shox2P70390 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.3□□□□□ -0.44
Shox2P70390 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Shox2P70390 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC12.3□□□□□ -0.44
Shox2P70390 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Shox2P70390 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC12.3□□□□□ -0.44
Shox2P70390 Gm44064-201ENSMUST00000204964 1087 ntBASIC12.3□□□□□ -0.44
Shox2P70390 AC132104.2-201ENSMUST00000215011 266 ntBASIC12.3□□□□□ -0.44
Shox2P70390 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Shox2P70390 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Shox2P70390 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC12.3□□□□□ -0.44
Shox2P70390 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Shox2P70390 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Shox2P70390 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC12.3□□□□□ -0.44
Shox2P70390 Gm24136-201ENSMUST00000083374 165 ntBASIC12.3□□□□□ -0.44
Shox2P70390 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC12.3□□□□□ -0.44
Shox2P70390 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Shox2P70390 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Shox2P70390 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Shox2P70390 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Shox2P70390 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Shox2P70390 AC154314.2-201ENSMUST00000223677 3502 ntBASIC12.3□□□□□ -0.44
Shox2P70390 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Shox2P70390 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Shox2P70390 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Shox2P70390 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Shox2P70390 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Shox2P70390 Gm21136-201ENSMUST00000186812 2575 ntBASIC12.29□□□□□ -0.44
Shox2P70390 Gm6605-201ENSMUST00000031488 2574 ntBASIC12.29□□□□□ -0.44
Shox2P70390 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Shox2P70390 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Shox2P70390 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Shox2P70390 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Shox2P70390 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Shox2P70390 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Shox2P70390 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Shox2P70390 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Shox2P70390 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Shox2P70390 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Shox2P70390 Gm36940-201ENSMUST00000194281 2036 ntBASIC12.29□□□□□ -0.44
Shox2P70390 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Shox2P70390 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Shox2P70390 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC12.29□□□□□ -0.44
Shox2P70390 Gm14767-201ENSMUST00000121559 586 ntBASIC12.29□□□□□ -0.44
Shox2P70390 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC12.29□□□□□ -0.44
Shox2P70390 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC12.29□□□□□ -0.44
Shox2P70390 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Shox2P70390 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Shox2P70390 Gm38223-201ENSMUST00000194484 695 ntBASIC12.29□□□□□ -0.44
Shox2P70390 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC12.29□□□□□ -0.44
Shox2P70390 Gm43416-201ENSMUST00000201916 1015 ntBASIC12.29□□□□□ -0.44
Shox2P70390 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC12.29□□□□□ -0.44
Shox2P70390 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC12.29□□□□□ -0.44
Shox2P70390 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC12.29□□□□□ -0.44
Shox2P70390 AC139580.1-202ENSMUST00000223574 928 ntBASIC12.29□□□□□ -0.44
Shox2P70390 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Shox2P70390 Gm8420-201ENSMUST00000097103 598 ntBASIC12.29□□□□□ -0.44
Shox2P70390 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Shox2P70390 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms