Protein–RNA interactions for Protein: P68404

Prkcb, Protein kinase C beta type, mousemouse

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkcbP68404 Gm5869-201ENSMUST00000200248 1257 ntBASIC13.5□□□□□ -0.25
PrkcbP68404 Gm44958-201ENSMUST00000203734 736 ntBASIC13.5□□□□□ -0.25
PrkcbP68404 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC13.5□□□□□ -0.25
PrkcbP68404 Gzmn-202ENSMUST00000225535 989 ntBASIC13.5□□□□□ -0.25
PrkcbP68404 AC169036.1-201ENSMUST00000227994 296 ntBASIC13.5□□□□□ -0.25
PrkcbP68404 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PrkcbP68404 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PrkcbP68404 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PrkcbP68404 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PrkcbP68404 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PrkcbP68404 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.5□□□□□ -0.25
PrkcbP68404 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
PrkcbP68404 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PrkcbP68404 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
PrkcbP68404 AC123834.1-201ENSMUST00000225346 2043 ntBASIC13.5□□□□□ -0.25
PrkcbP68404 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PrkcbP68404 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PrkcbP68404 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.5□□□□□ -0.25
PrkcbP68404 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
PrkcbP68404 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PrkcbP68404 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
PrkcbP68404 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PrkcbP68404 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PrkcbP68404 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PrkcbP68404 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PrkcbP68404 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
PrkcbP68404 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
PrkcbP68404 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PrkcbP68404 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PrkcbP68404 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
PrkcbP68404 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PrkcbP68404 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
PrkcbP68404 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PrkcbP68404 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
PrkcbP68404 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PrkcbP68404 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PrkcbP68404 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
PrkcbP68404 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PrkcbP68404 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
PrkcbP68404 Gm2606-201ENSMUST00000100754 1002 ntBASIC13.49□□□□□ -0.25
PrkcbP68404 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
PrkcbP68404 Gm15236-201ENSMUST00000117309 379 ntBASIC13.49□□□□□ -0.25
PrkcbP68404 Gm12286-201ENSMUST00000119246 1002 ntBASIC13.49□□□□□ -0.25
PrkcbP68404 Gm13665-201ENSMUST00000120830 528 ntBASIC13.49□□□□□ -0.25
PrkcbP68404 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
PrkcbP68404 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC13.49□□□□□ -0.25
PrkcbP68404 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC13.49□□□□□ -0.25
PrkcbP68404 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
PrkcbP68404 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
PrkcbP68404 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PrkcbP68404 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC13.49□□□□□ -0.25
PrkcbP68404 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC13.49□□□□□ -0.25
PrkcbP68404 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PrkcbP68404 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PrkcbP68404 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
PrkcbP68404 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PrkcbP68404 AC122197.2-201ENSMUST00000219196 1635 ntBASIC13.49□□□□□ -0.25
PrkcbP68404 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PrkcbP68404 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
PrkcbP68404 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
PrkcbP68404 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
PrkcbP68404 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
PrkcbP68404 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PrkcbP68404 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
PrkcbP68404 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
PrkcbP68404 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PrkcbP68404 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
PrkcbP68404 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PrkcbP68404 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PrkcbP68404 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
PrkcbP68404 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PrkcbP68404 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PrkcbP68404 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
PrkcbP68404 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
PrkcbP68404 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC13.48□□□□□ -0.25
PrkcbP68404 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PrkcbP68404 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC13.48□□□□□ -0.25
PrkcbP68404 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
PrkcbP68404 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC13.48□□□□□ -0.25
PrkcbP68404 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
PrkcbP68404 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PrkcbP68404 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC13.48□□□□□ -0.25
PrkcbP68404 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PrkcbP68404 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
PrkcbP68404 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC13.48□□□□□ -0.25
PrkcbP68404 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC13.48□□□□□ -0.25
PrkcbP68404 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC13.48□□□□□ -0.25
PrkcbP68404 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC13.48□□□□□ -0.25
PrkcbP68404 AC159747.1-201ENSMUST00000219903 265 ntBASIC13.48□□□□□ -0.25
PrkcbP68404 CT485787.1-201ENSMUST00000225617 968 ntBASIC13.48□□□□□ -0.25
PrkcbP68404 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC13.48□□□□□ -0.25
PrkcbP68404 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
PrkcbP68404 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
PrkcbP68404 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
PrkcbP68404 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
PrkcbP68404 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
PrkcbP68404 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PrkcbP68404 Gm13142-201ENSMUST00000117213 1453 ntBASIC13.48□□□□□ -0.25
PrkcbP68404 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PrkcbP68404 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms