Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lhx1P63006 Gm12015-201ENSMUST00000117065 843 ntBASIC12.27□□□□□ -0.45
Lhx1P63006 Gm12286-201ENSMUST00000119246 1002 ntBASIC12.27□□□□□ -0.45
Lhx1P63006 Gm9083-201ENSMUST00000120423 819 ntBASIC12.27□□□□□ -0.45
Lhx1P63006 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Lhx1P63006 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Lhx1P63006 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Lhx1P63006 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC12.27□□□□□ -0.45
Lhx1P63006 Gm23119-201ENSMUST00000158610 140 ntBASIC12.27□□□□□ -0.45
Lhx1P63006 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Lhx1P63006 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC12.27□□□□□ -0.45
Lhx1P63006 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12.27□□□□□ -0.45
Lhx1P63006 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Lhx1P63006 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC12.27□□□□□ -0.45
Lhx1P63006 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Lhx1P63006 AA914427-201ENSMUST00000193194 1166 ntBASIC12.27□□□□□ -0.45
Lhx1P63006 Gm42937-201ENSMUST00000197360 752 ntBASIC12.27□□□□□ -0.45
Lhx1P63006 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC12.27□□□□□ -0.45
Lhx1P63006 Gm44651-201ENSMUST00000207343 372 ntBASIC12.27□□□□□ -0.45
Lhx1P63006 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Lhx1P63006 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC12.27□□□□□ -0.45
Lhx1P63006 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC12.27□□□□□ -0.45
Lhx1P63006 Gm9176-201ENSMUST00000219955 1120 ntBASIC12.27□□□□□ -0.45
Lhx1P63006 AC123665.1-201ENSMUST00000228204 438 ntBASIC12.27□□□□□ -0.45
Lhx1P63006 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lhx1P63006 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lhx1P63006 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Lhx1P63006 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lhx1P63006 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Lhx1P63006 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lhx1P63006 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Lhx1P63006 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lhx1P63006 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Lhx1P63006 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Lhx1P63006 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lhx1P63006 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lhx1P63006 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Lhx1P63006 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Lhx1P63006 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lhx1P63006 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lhx1P63006 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lhx1P63006 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Lhx1P63006 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Lhx1P63006 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Lhx1P63006 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lhx1P63006 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lhx1P63006 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Lhx1P63006 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lhx1P63006 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lhx1P63006 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lhx1P63006 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lhx1P63006 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lhx1P63006 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lhx1P63006 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
Lhx1P63006 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Lhx1P63006 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Lhx1P63006 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.26□□□□□ -0.45
Lhx1P63006 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Lhx1P63006 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Lhx1P63006 Gm12012-201ENSMUST00000118857 1066 ntBASIC12.26□□□□□ -0.45
Lhx1P63006 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Lhx1P63006 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC12.26□□□□□ -0.45
Lhx1P63006 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Lhx1P63006 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Lhx1P63006 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC12.26□□□□□ -0.45
Lhx1P63006 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC12.26□□□□□ -0.45
Lhx1P63006 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lhx1P63006 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC12.26□□□□□ -0.45
Lhx1P63006 AC093022.1-201ENSMUST00000226949 1072 ntBASIC12.26□□□□□ -0.45
Lhx1P63006 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Lhx1P63006 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lhx1P63006 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lhx1P63006 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lhx1P63006 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Lhx1P63006 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lhx1P63006 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lhx1P63006 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lhx1P63006 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lhx1P63006 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lhx1P63006 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lhx1P63006 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lhx1P63006 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lhx1P63006 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lhx1P63006 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lhx1P63006 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Lhx1P63006 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Lhx1P63006 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.26□□□□□ -0.45
Lhx1P63006 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC12.26□□□□□ -0.45
Lhx1P63006 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Lhx1P63006 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Lhx1P63006 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Lhx1P63006 AC123857.2-201ENSMUST00000225756 1582 ntBASIC12.26□□□□□ -0.45
Lhx1P63006 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lhx1P63006 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12.26□□□□□ -0.45
Lhx1P63006 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lhx1P63006 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lhx1P63006 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Lhx1P63006 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lhx1P63006 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lhx1P63006 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms