Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lsm3P62311 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC11.34□□□□□ -0.59
Lsm3P62311 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Lsm3P62311 Gm42498-201ENSMUST00000199981 1372 ntBASIC11.34□□□□□ -0.59
Lsm3P62311 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Lsm3P62311 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Lsm3P62311 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC11.34□□□□□ -0.59
Lsm3P62311 Gm12485-201ENSMUST00000119641 291 ntBASIC11.34□□□□□ -0.59
Lsm3P62311 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Lsm3P62311 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC11.34□□□□□ -0.59
Lsm3P62311 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Lsm3P62311 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC11.34□□□□□ -0.59
Lsm3P62311 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Lsm3P62311 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Lsm3P62311 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lsm3P62311 Gm43125-201ENSMUST00000201724 730 ntBASIC11.34□□□□□ -0.59
Lsm3P62311 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Lsm3P62311 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Lsm3P62311 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Lsm3P62311 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Lsm3P62311 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lsm3P62311 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lsm3P62311 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lsm3P62311 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Lsm3P62311 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Lsm3P62311 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lsm3P62311 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lsm3P62311 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC11.34□□□□□ -0.59
Lsm3P62311 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lsm3P62311 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lsm3P62311 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lsm3P62311 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Lsm3P62311 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Lsm3P62311 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lsm3P62311 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lsm3P62311 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lsm3P62311 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lsm3P62311 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Lsm3P62311 AC124577.2-201ENSMUST00000217413 2420 ntBASIC11.34□□□□□ -0.59
Lsm3P62311 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Lsm3P62311 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Lsm3P62311 Gm42913-201ENSMUST00000197936 1853 ntBASIC11.34□□□□□ -0.59
Lsm3P62311 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Lsm3P62311 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lsm3P62311 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
Lsm3P62311 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lsm3P62311 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lsm3P62311 Gm37580-201ENSMUST00000192408 2800 ntBASIC11.33□□□□□ -0.6
Lsm3P62311 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Lsm3P62311 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC11.33□□□□□ -0.6
Lsm3P62311 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lsm3P62311 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lsm3P62311 AC127597.1-201ENSMUST00000225697 5711 ntBASIC11.33□□□□□ -0.6
Lsm3P62311 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lsm3P62311 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Lsm3P62311 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Lsm3P62311 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lsm3P62311 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC11.33□□□□□ -0.6
Lsm3P62311 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lsm3P62311 Mir686-201ENSMUST00000102174 109 ntBASIC11.33□□□□□ -0.6
Lsm3P62311 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC11.33□□□□□ -0.6
Lsm3P62311 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC11.33□□□□□ -0.6
Lsm3P62311 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Lsm3P62311 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC11.33□□□□□ -0.6
Lsm3P62311 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
Lsm3P62311 Gm28630-201ENSMUST00000187806 498 ntBASIC11.33□□□□□ -0.6
Lsm3P62311 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC11.33□□□□□ -0.6
Lsm3P62311 Ighv1-60-201ENSMUST00000195816 405 ntBASIC11.33□□□□□ -0.6
Lsm3P62311 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
Lsm3P62311 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lsm3P62311 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lsm3P62311 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Lsm3P62311 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lsm3P62311 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lsm3P62311 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lsm3P62311 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Lsm3P62311 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Lsm3P62311 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lsm3P62311 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC11.33□□□□□ -0.6
Lsm3P62311 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC11.33□□□□□ -0.6
Lsm3P62311 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
Lsm3P62311 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Lsm3P62311 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lsm3P62311 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lsm3P62311 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lsm3P62311 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Lsm3P62311 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lsm3P62311 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Lsm3P62311 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC11.33□□□□□ -0.6
Lsm3P62311 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Lsm3P62311 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC11.33□□□□□ -0.6
Lsm3P62311 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Lsm3P62311 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lsm3P62311 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lsm3P62311 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lsm3P62311 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lsm3P62311 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC11.32□□□□□ -0.6
Lsm3P62311 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lsm3P62311 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Lsm3P62311 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms