Protein–RNA interactions for Protein: P58774

Tpm2, Tropomyosin beta chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm2P58774 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC14.37□□□□□ -0.11
Tpm2P58774 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC14.37□□□□□ -0.11
Tpm2P58774 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC14.37□□□□□ -0.11
Tpm2P58774 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Tpm2P58774 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tpm2P58774 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tpm2P58774 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tpm2P58774 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tpm2P58774 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tpm2P58774 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
Tpm2P58774 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tpm2P58774 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tpm2P58774 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tpm2P58774 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Tpm2P58774 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tpm2P58774 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC14.37□□□□□ -0.11
Tpm2P58774 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Tpm2P58774 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Tpm2P58774 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Tpm2P58774 AC154262.2-202ENSMUST00000225158 1331 ntBASIC14.37□□□□□ -0.11
Tpm2P58774 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Tpm2P58774 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tpm2P58774 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Tpm2P58774 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Tpm2P58774 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tpm2P58774 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC14.36□□□□□ -0.11
Tpm2P58774 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Tpm2P58774 Gm9755-201ENSMUST00000032981 1356 ntBASIC14.36□□□□□ -0.11
Tpm2P58774 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tpm2P58774 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tpm2P58774 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Tpm2P58774 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tpm2P58774 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Tpm2P58774 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC14.36□□□□□ -0.11
Tpm2P58774 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tpm2P58774 Gm6447-201ENSMUST00000118905 835 ntBASIC14.36□□□□□ -0.11
Tpm2P58774 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC14.36□□□□□ -0.11
Tpm2P58774 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC14.36□□□□□ -0.11
Tpm2P58774 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tpm2P58774 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tpm2P58774 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Tpm2P58774 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC14.36□□□□□ -0.11
Tpm2P58774 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tpm2P58774 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Tpm2P58774 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tpm2P58774 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Tpm2P58774 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tpm2P58774 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Tpm2P58774 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Tpm2P58774 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tpm2P58774 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Tpm2P58774 Gm10686-201ENSMUST00000215389 3247 ntBASIC14.36□□□□□ -0.11
Tpm2P58774 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
Tpm2P58774 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tpm2P58774 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tpm2P58774 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tpm2P58774 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tpm2P58774 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tpm2P58774 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tpm2P58774 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Tpm2P58774 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tpm2P58774 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC14.35□□□□□ -0.11
Tpm2P58774 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
Tpm2P58774 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Tpm2P58774 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tpm2P58774 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tpm2P58774 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tpm2P58774 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC14.35□□□□□ -0.11
Tpm2P58774 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tpm2P58774 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC14.35□□□□□ -0.11
Tpm2P58774 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Tpm2P58774 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC14.35□□□□□ -0.11
Tpm2P58774 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC14.35□□□□□ -0.11
Tpm2P58774 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC14.35□□□□□ -0.11
Tpm2P58774 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Tpm2P58774 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Tpm2P58774 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Tpm2P58774 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tpm2P58774 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Tpm2P58774 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Tpm2P58774 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tpm2P58774 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tpm2P58774 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tpm2P58774 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tpm2P58774 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Tpm2P58774 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tpm2P58774 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tpm2P58774 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC14.34□□□□□ -0.11
Tpm2P58774 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tpm2P58774 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tpm2P58774 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tpm2P58774 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tpm2P58774 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tpm2P58774 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tpm2P58774 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Tpm2P58774 Gm10040-201ENSMUST00000080726 1662 ntBASIC14.34□□□□□ -0.11
Tpm2P58774 Gm26684-202ENSMUST00000228229 8257 ntBASIC14.34□□□□□ -0.11
Tpm2P58774 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC14.34□□□□□ -0.11
Tpm2P58774 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tpm2P58774 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms