Protein–RNA interactions for Protein: P56726

Smo, Smoothened homolog, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SmoP56726 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SmoP56726 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SmoP56726 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SmoP56726 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SmoP56726 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SmoP56726 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
SmoP56726 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
SmoP56726 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.55□□□□□ -0.4
SmoP56726 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
SmoP56726 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SmoP56726 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SmoP56726 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.54□□□□□ -0.4
SmoP56726 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
SmoP56726 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SmoP56726 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.54□□□□□ -0.4
SmoP56726 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SmoP56726 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
SmoP56726 Gm4760-201ENSMUST00000119663 1030 ntBASIC12.54□□□□□ -0.4
SmoP56726 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SmoP56726 Gm6963-201ENSMUST00000147879 379 ntBASIC12.54□□□□□ -0.4
SmoP56726 Gm5070-201ENSMUST00000177599 862 ntBASIC12.54□□□□□ -0.4
SmoP56726 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC12.54□□□□□ -0.4
SmoP56726 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SmoP56726 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC12.54□□□□□ -0.4
SmoP56726 Gm45691-201ENSMUST00000206905 1120 ntBASIC12.54□□□□□ -0.4
SmoP56726 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC12.54□□□□□ -0.4
SmoP56726 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SmoP56726 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
SmoP56726 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC12.54□□□□□ -0.4
SmoP56726 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SmoP56726 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SmoP56726 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
SmoP56726 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.54□□□□□ -0.4
SmoP56726 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SmoP56726 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SmoP56726 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SmoP56726 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SmoP56726 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
SmoP56726 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
SmoP56726 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SmoP56726 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
SmoP56726 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SmoP56726 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
SmoP56726 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SmoP56726 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC12.54□□□□□ -0.4
SmoP56726 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC12.53□□□□□ -0.4
SmoP56726 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC12.53□□□□□ -0.4
SmoP56726 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
SmoP56726 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
SmoP56726 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SmoP56726 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SmoP56726 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SmoP56726 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SmoP56726 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
SmoP56726 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
SmoP56726 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SmoP56726 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SmoP56726 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
SmoP56726 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SmoP56726 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
SmoP56726 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SmoP56726 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
SmoP56726 Gm14644-201ENSMUST00000116671 647 ntBASIC12.53□□□□□ -0.4
SmoP56726 Gm13665-201ENSMUST00000120830 528 ntBASIC12.53□□□□□ -0.4
SmoP56726 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SmoP56726 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC12.53□□□□□ -0.4
SmoP56726 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SmoP56726 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC12.53□□□□□ -0.4
SmoP56726 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
SmoP56726 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.53□□□□□ -0.4
SmoP56726 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC12.53□□□□□ -0.4
SmoP56726 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SmoP56726 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC12.53□□□□□ -0.4
SmoP56726 Gm9176-201ENSMUST00000219955 1120 ntBASIC12.53□□□□□ -0.4
SmoP56726 Gzmn-202ENSMUST00000225535 989 ntBASIC12.53□□□□□ -0.4
SmoP56726 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SmoP56726 Rassf8-202ENSMUST00000058538 1131 ntBASIC12.53□□□□□ -0.4
SmoP56726 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SmoP56726 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
SmoP56726 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SmoP56726 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
SmoP56726 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SmoP56726 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
SmoP56726 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
SmoP56726 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.53□□□□□ -0.4
SmoP56726 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
SmoP56726 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SmoP56726 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SmoP56726 Gm18626-201ENSMUST00000221512 1409 ntBASIC12.53□□□□□ -0.4
SmoP56726 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
SmoP56726 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SmoP56726 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
SmoP56726 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
SmoP56726 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
SmoP56726 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.4
SmoP56726 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SmoP56726 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
SmoP56726 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SmoP56726 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SmoP56726 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms