Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rrp1P56183 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rrp1P56183 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rrp1P56183 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Rrp1P56183 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Rrp1P56183 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rrp1P56183 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rrp1P56183 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Rrp1P56183 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rrp1P56183 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rrp1P56183 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rrp1P56183 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rrp1P56183 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC14.07□□□□□ -0.16
Rrp1P56183 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC14.07□□□□□ -0.16
Rrp1P56183 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC14.07□□□□□ -0.16
Rrp1P56183 AC155237.1-201ENSMUST00000226196 1279 ntBASIC14.07□□□□□ -0.16
Rrp1P56183 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rrp1P56183 Gm24526-201ENSMUST00000082921 158 ntBASIC14.07□□□□□ -0.16
Rrp1P56183 CT573086.2-201ENSMUST00000227277 4992 ntBASIC14.07□□□□□ -0.16
Rrp1P56183 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Rrp1P56183 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rrp1P56183 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rrp1P56183 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rrp1P56183 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC14.07□□□□□ -0.16
Rrp1P56183 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Rrp1P56183 Gm15163-201ENSMUST00000120749 1302 ntBASIC14.07□□□□□ -0.16
Rrp1P56183 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rrp1P56183 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Rrp1P56183 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Rrp1P56183 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Rrp1P56183 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rrp1P56183 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rrp1P56183 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC14.07□□□□□ -0.16
Rrp1P56183 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rrp1P56183 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rrp1P56183 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rrp1P56183 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rrp1P56183 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
Rrp1P56183 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rrp1P56183 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rrp1P56183 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rrp1P56183 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rrp1P56183 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rrp1P56183 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rrp1P56183 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rrp1P56183 Gm9361-201ENSMUST00000198695 1507 ntBASIC14.06□□□□□ -0.16
Rrp1P56183 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rrp1P56183 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rrp1P56183 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rrp1P56183 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rrp1P56183 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rrp1P56183 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC14.06□□□□□ -0.16
Rrp1P56183 Gm12960-201ENSMUST00000120017 1066 ntBASIC14.06□□□□□ -0.16
Rrp1P56183 Gm15806-201ENSMUST00000120696 955 ntBASIC14.06□□□□□ -0.16
Rrp1P56183 Gm11964-201ENSMUST00000120982 444 ntBASIC14.06□□□□□ -0.16
Rrp1P56183 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rrp1P56183 Gm24196-201ENSMUST00000179161 110 ntBASIC14.06□□□□□ -0.16
Rrp1P56183 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC14.06□□□□□ -0.16
Rrp1P56183 Gm4768-201ENSMUST00000206199 686 ntBASIC14.06□□□□□ -0.16
Rrp1P56183 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC14.06□□□□□ -0.16
Rrp1P56183 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rrp1P56183 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rrp1P56183 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rrp1P56183 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Rrp1P56183 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rrp1P56183 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Rrp1P56183 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rrp1P56183 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Rrp1P56183 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rrp1P56183 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rrp1P56183 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rrp1P56183 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rrp1P56183 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rrp1P56183 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC14.06□□□□□ -0.16
Rrp1P56183 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC14.06□□□□□ -0.16
Rrp1P56183 Gm43823-201ENSMUST00000197391 1808 ntBASIC14.06□□□□□ -0.16
Rrp1P56183 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rrp1P56183 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rrp1P56183 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rrp1P56183 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rrp1P56183 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rrp1P56183 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC14.06□□□□□ -0.16
Rrp1P56183 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rrp1P56183 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rrp1P56183 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rrp1P56183 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rrp1P56183 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rrp1P56183 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC14.05□□□□□ -0.16
Rrp1P56183 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rrp1P56183 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rrp1P56183 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rrp1P56183 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC14.05□□□□□ -0.16
Rrp1P56183 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rrp1P56183 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rrp1P56183 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rrp1P56183 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rrp1P56183 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rrp1P56183 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC14.05□□□□□ -0.16
Rrp1P56183 Gm44882-201ENSMUST00000205702 802 ntBASIC14.05□□□□□ -0.16
Rrp1P56183 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms