Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdkn2bP55271 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC11.94□□□□□ -0.5
Cdkn2bP55271 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Cdkn2bP55271 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Cdkn2bP55271 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdkn2bP55271 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdkn2bP55271 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdkn2bP55271 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC11.94□□□□□ -0.5
Cdkn2bP55271 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdkn2bP55271 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Cdkn2bP55271 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdkn2bP55271 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cdkn2bP55271 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Cdkn2bP55271 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdkn2bP55271 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdkn2bP55271 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC11.94□□□□□ -0.5
Cdkn2bP55271 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC11.94□□□□□ -0.5
Cdkn2bP55271 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cdkn2bP55271 Gm12091-201ENSMUST00000146791 830 ntBASIC11.94□□□□□ -0.5
Cdkn2bP55271 Gm5866-201ENSMUST00000177881 973 ntBASIC11.94□□□□□ -0.5
Cdkn2bP55271 Gm27243-201ENSMUST00000183964 521 ntBASIC11.94□□□□□ -0.5
Cdkn2bP55271 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC11.94□□□□□ -0.5
Cdkn2bP55271 Gm45384-201ENSMUST00000210451 277 ntBASIC11.94□□□□□ -0.5
Cdkn2bP55271 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC11.94□□□□□ -0.5
Cdkn2bP55271 CT030657.3-201ENSMUST00000222707 1200 ntBASIC11.94□□□□□ -0.5
Cdkn2bP55271 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdkn2bP55271 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Cdkn2bP55271 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC11.94□□□□□ -0.5
Cdkn2bP55271 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdkn2bP55271 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdkn2bP55271 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdkn2bP55271 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdkn2bP55271 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdkn2bP55271 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cdkn2bP55271 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdkn2bP55271 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cdkn2bP55271 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdkn2bP55271 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdkn2bP55271 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Cdkn2bP55271 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdkn2bP55271 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC11.94□□□□□ -0.5
Cdkn2bP55271 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdkn2bP55271 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdkn2bP55271 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cdkn2bP55271 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdkn2bP55271 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cdkn2bP55271 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdkn2bP55271 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cdkn2bP55271 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC11.94□□□□□ -0.5
Cdkn2bP55271 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdkn2bP55271 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Cdkn2bP55271 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cdkn2bP55271 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cdkn2bP55271 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdkn2bP55271 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdkn2bP55271 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdkn2bP55271 Gm13050-201ENSMUST00000122149 1345 ntBASIC11.93□□□□□ -0.5
Cdkn2bP55271 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdkn2bP55271 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Cdkn2bP55271 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdkn2bP55271 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cdkn2bP55271 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdkn2bP55271 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC11.93□□□□□ -0.5
Cdkn2bP55271 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdkn2bP55271 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cdkn2bP55271 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdkn2bP55271 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cdkn2bP55271 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cdkn2bP55271 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdkn2bP55271 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cdkn2bP55271 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdkn2bP55271 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdkn2bP55271 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cdkn2bP55271 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC11.93□□□□□ -0.5
Cdkn2bP55271 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cdkn2bP55271 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC11.93□□□□□ -0.5
Cdkn2bP55271 Gm5626-201ENSMUST00000222151 1058 ntBASIC11.93□□□□□ -0.5
Cdkn2bP55271 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdkn2bP55271 Gm6180-201ENSMUST00000065243 498 ntBASIC11.93□□□□□ -0.5
Cdkn2bP55271 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdkn2bP55271 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Cdkn2bP55271 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cdkn2bP55271 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdkn2bP55271 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdkn2bP55271 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cdkn2bP55271 Gm15897-201ENSMUST00000117770 1486 ntBASIC11.93□□□□□ -0.5
Cdkn2bP55271 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC11.93□□□□□ -0.5
Cdkn2bP55271 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Cdkn2bP55271 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cdkn2bP55271 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cdkn2bP55271 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cdkn2bP55271 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC11.93□□□□□ -0.5
Cdkn2bP55271 Gm10339-203ENSMUST00000225409 1671 ntBASIC11.93□□□□□ -0.5
Cdkn2bP55271 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdkn2bP55271 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdkn2bP55271 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.93□□□□□ -0.5
Cdkn2bP55271 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Cdkn2bP55271 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Cdkn2bP55271 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdkn2bP55271 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms