Protein–RNA interactions for Protein: P54285

Cacnb3, Voltage-dependent L-type calcium channel subunit beta-3, mousemouse

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb3P54285 AC151895.1-201ENSMUST00000219025 1742 ntBASIC14.53□□□□□ -0.08
Cacnb3P54285 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cacnb3P54285 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cacnb3P54285 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cacnb3P54285 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cacnb3P54285 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cacnb3P54285 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cacnb3P54285 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cacnb3P54285 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC14.53□□□□□ -0.08
Cacnb3P54285 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cacnb3P54285 Gm17827-201ENSMUST00000211825 742 ntBASIC14.53□□□□□ -0.08
Cacnb3P54285 AC154305.4-201ENSMUST00000224520 614 ntBASIC14.53□□□□□ -0.08
Cacnb3P54285 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cacnb3P54285 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cacnb3P54285 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cacnb3P54285 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Cacnb3P54285 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Cacnb3P54285 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Cacnb3P54285 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC14.53□□□□□ -0.08
Cacnb3P54285 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Cacnb3P54285 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cacnb3P54285 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cacnb3P54285 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Cacnb3P54285 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cacnb3P54285 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
Cacnb3P54285 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cacnb3P54285 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cacnb3P54285 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cacnb3P54285 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cacnb3P54285 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cacnb3P54285 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cacnb3P54285 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cacnb3P54285 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cacnb3P54285 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cacnb3P54285 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cacnb3P54285 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cacnb3P54285 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cacnb3P54285 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC14.52□□□□□ -0.08
Cacnb3P54285 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cacnb3P54285 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Cacnb3P54285 Gm22133-201ENSMUST00000102082 109 ntBASIC14.52□□□□□ -0.09
Cacnb3P54285 Mir680-2-201ENSMUST00000102163 110 ntBASIC14.52□□□□□ -0.09
Cacnb3P54285 Gm23251-201ENSMUST00000103773 110 ntBASIC14.52□□□□□ -0.09
Cacnb3P54285 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Cacnb3P54285 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cacnb3P54285 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cacnb3P54285 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC14.52□□□□□ -0.09
Cacnb3P54285 Gm19459-201ENSMUST00000176240 835 ntBASIC14.52□□□□□ -0.09
Cacnb3P54285 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC14.52□□□□□ -0.09
Cacnb3P54285 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
Cacnb3P54285 Gm44958-201ENSMUST00000203734 736 ntBASIC14.52□□□□□ -0.09
Cacnb3P54285 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Cacnb3P54285 AC153954.1-201ENSMUST00000216959 255 ntBASIC14.52□□□□□ -0.09
Cacnb3P54285 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC14.52□□□□□ -0.09
Cacnb3P54285 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC14.52□□□□□ -0.09
Cacnb3P54285 AC133602.1-201ENSMUST00000227510 509 ntBASIC14.52□□□□□ -0.09
Cacnb3P54285 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cacnb3P54285 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cacnb3P54285 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cacnb3P54285 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cacnb3P54285 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Cacnb3P54285 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cacnb3P54285 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cacnb3P54285 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Cacnb3P54285 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cacnb3P54285 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Cacnb3P54285 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cacnb3P54285 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cacnb3P54285 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cacnb3P54285 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.52□□□□□ -0.09
Cacnb3P54285 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Cacnb3P54285 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cacnb3P54285 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cacnb3P54285 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cacnb3P54285 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cacnb3P54285 Gm43045-201ENSMUST00000198725 2095 ntBASIC14.51□□□□□ -0.09
Cacnb3P54285 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cacnb3P54285 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cacnb3P54285 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cacnb3P54285 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cacnb3P54285 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cacnb3P54285 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cacnb3P54285 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cacnb3P54285 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cacnb3P54285 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cacnb3P54285 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cacnb3P54285 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC14.51□□□□□ -0.09
Cacnb3P54285 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
Cacnb3P54285 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC14.51□□□□□ -0.09
Cacnb3P54285 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
Cacnb3P54285 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cacnb3P54285 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC14.51□□□□□ -0.09
Cacnb3P54285 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC14.51□□□□□ -0.09
Cacnb3P54285 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC14.51□□□□□ -0.09
Cacnb3P54285 AC154849.4-201ENSMUST00000224868 365 ntBASIC14.51□□□□□ -0.09
Cacnb3P54285 Mir219a-1-201ENSMUST00000083621 110 ntBASIC14.51□□□□□ -0.09
Cacnb3P54285 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Cacnb3P54285 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
Cacnb3P54285 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cacnb3P54285 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms