Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.44□□□□□ -0.42
Atxn1P54254 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Atxn1P54254 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Atxn1P54254 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.44□□□□□ -0.42
Atxn1P54254 Gm38376-201ENSMUST00000195493 2253 ntBASIC12.44□□□□□ -0.42
Atxn1P54254 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.44□□□□□ -0.42
Atxn1P54254 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Atxn1P54254 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Atxn1P54254 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Atxn1P54254 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Atxn1P54254 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Atxn1P54254 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Atxn1P54254 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Atxn1P54254 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Atxn1P54254 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Atxn1P54254 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Atxn1P54254 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Atxn1P54254 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Atxn1P54254 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Atxn1P54254 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Atxn1P54254 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Atxn1P54254 Gm12795-201ENSMUST00000117594 539 ntBASIC12.43□□□□□ -0.42
Atxn1P54254 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Atxn1P54254 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Atxn1P54254 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC12.43□□□□□ -0.42
Atxn1P54254 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
Atxn1P54254 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC12.43□□□□□ -0.42
Atxn1P54254 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Atxn1P54254 Gm19353-201ENSMUST00000184561 445 ntBASIC12.43□□□□□ -0.42
Atxn1P54254 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC12.43□□□□□ -0.42
Atxn1P54254 Rprl1-202ENSMUST00000198476 238 ntBASIC12.43□□□□□ -0.42
Atxn1P54254 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC12.43□□□□□ -0.42
Atxn1P54254 Gm45691-201ENSMUST00000206905 1120 ntBASIC12.43□□□□□ -0.42
Atxn1P54254 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC12.43□□□□□ -0.42
Atxn1P54254 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC12.43□□□□□ -0.42
Atxn1P54254 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Atxn1P54254 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Atxn1P54254 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Atxn1P54254 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Atxn1P54254 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Atxn1P54254 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Atxn1P54254 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Atxn1P54254 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.43□□□□□ -0.42
Atxn1P54254 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.43□□□□□ -0.42
Atxn1P54254 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Atxn1P54254 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC12.43□□□□□ -0.42
Atxn1P54254 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Atxn1P54254 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC12.43□□□□□ -0.42
Atxn1P54254 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Atxn1P54254 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Atxn1P54254 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Atxn1P54254 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC12.43□□□□□ -0.42
Atxn1P54254 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Atxn1P54254 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Atxn1P54254 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Atxn1P54254 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Atxn1P54254 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Atxn1P54254 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Atxn1P54254 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Atxn1P54254 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Atxn1P54254 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Atxn1P54254 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Atxn1P54254 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Atxn1P54254 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Atxn1P54254 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.42□□□□□ -0.42
Atxn1P54254 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Atxn1P54254 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
Atxn1P54254 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.42□□□□□ -0.42
Atxn1P54254 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC12.42□□□□□ -0.42
Atxn1P54254 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC12.42□□□□□ -0.42
Atxn1P54254 Gm10051-201ENSMUST00000145209 414 ntBASIC12.42□□□□□ -0.42
Atxn1P54254 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Atxn1P54254 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Atxn1P54254 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC12.42□□□□□ -0.42
Atxn1P54254 Gm38210-201ENSMUST00000191944 809 ntBASIC12.42□□□□□ -0.42
Atxn1P54254 Gm17812-201ENSMUST00000204935 318 ntBASIC12.42□□□□□ -0.42
Atxn1P54254 AC166992.1-201ENSMUST00000216356 565 ntBASIC12.42□□□□□ -0.42
Atxn1P54254 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC12.42□□□□□ -0.42
Atxn1P54254 AC132901.1-201ENSMUST00000224345 508 ntBASIC12.42□□□□□ -0.42
Atxn1P54254 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Atxn1P54254 Gm22058-201ENSMUST00000083393 310 ntBASIC12.42□□□□□ -0.42
Atxn1P54254 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Atxn1P54254 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Atxn1P54254 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
Atxn1P54254 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Atxn1P54254 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Atxn1P54254 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Atxn1P54254 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Atxn1P54254 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Atxn1P54254 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Atxn1P54254 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Atxn1P54254 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC12.42□□□□□ -0.42
Atxn1P54254 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Atxn1P54254 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Atxn1P54254 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Atxn1P54254 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Atxn1P54254 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Atxn1P54254 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Atxn1P54254 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.41□□□□□ -0.42
Atxn1P54254 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms