Protein–RNA interactions for Protein: P52194

Clgn, Calmegin, mousemouse

Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClgnP52194 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
ClgnP52194 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
ClgnP52194 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.79□□□□□ -0.36
ClgnP52194 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.79□□□□□ -0.36
ClgnP52194 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
ClgnP52194 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ClgnP52194 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ClgnP52194 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
ClgnP52194 Gm43818-201ENSMUST00000200605 466 ntBASIC12.79□□□□□ -0.36
ClgnP52194 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ClgnP52194 Gm10146-201ENSMUST00000072739 309 ntBASIC12.79□□□□□ -0.36
ClgnP52194 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ClgnP52194 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
ClgnP52194 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ClgnP52194 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ClgnP52194 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ClgnP52194 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ClgnP52194 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ClgnP52194 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
ClgnP52194 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
ClgnP52194 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ClgnP52194 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.78□□□□□ -0.36
ClgnP52194 Zscan30-202ENSMUST00000224144 1458 ntBASIC12.78□□□□□ -0.36
ClgnP52194 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
ClgnP52194 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ClgnP52194 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ClgnP52194 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ClgnP52194 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
ClgnP52194 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
ClgnP52194 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.78□□□□□ -0.36
ClgnP52194 Gm45532-201ENSMUST00000210342 3620 ntBASIC12.78□□□□□ -0.36
ClgnP52194 Gm8805-201ENSMUST00000117848 313 ntBASIC12.78□□□□□ -0.36
ClgnP52194 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC12.78□□□□□ -0.36
ClgnP52194 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.78□□□□□ -0.36
ClgnP52194 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ClgnP52194 Gm23363-201ENSMUST00000175024 79 ntBASIC12.78□□□□□ -0.36
ClgnP52194 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC12.78□□□□□ -0.36
ClgnP52194 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.78□□□□□ -0.36
ClgnP52194 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12.78□□□□□ -0.36
ClgnP52194 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ClgnP52194 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
ClgnP52194 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
ClgnP52194 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ClgnP52194 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ClgnP52194 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ClgnP52194 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ClgnP52194 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
ClgnP52194 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.78□□□□□ -0.36
ClgnP52194 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
ClgnP52194 Gm10110-202ENSMUST00000228705 3220 ntBASIC12.78□□□□□ -0.36
ClgnP52194 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
ClgnP52194 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
ClgnP52194 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC12.78□□□□□ -0.36
ClgnP52194 Gm6157-201ENSMUST00000199935 1897 ntBASIC12.78□□□□□ -0.36
ClgnP52194 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
ClgnP52194 Gm7553-201ENSMUST00000185805 1426 ntBASIC12.78□□□□□ -0.36
ClgnP52194 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
ClgnP52194 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
ClgnP52194 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
ClgnP52194 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
ClgnP52194 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ClgnP52194 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ClgnP52194 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ClgnP52194 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
ClgnP52194 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
ClgnP52194 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC12.77□□□□□ -0.36
ClgnP52194 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
ClgnP52194 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.36
ClgnP52194 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
ClgnP52194 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
ClgnP52194 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
ClgnP52194 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
ClgnP52194 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC12.77□□□□□ -0.36
ClgnP52194 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
ClgnP52194 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
ClgnP52194 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
ClgnP52194 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
ClgnP52194 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.77□□□□□ -0.36
ClgnP52194 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
ClgnP52194 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
ClgnP52194 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
ClgnP52194 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
ClgnP52194 Gm28719-201ENSMUST00000187779 1757 ntBASIC12.77□□□□□ -0.36
ClgnP52194 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ClgnP52194 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
ClgnP52194 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ClgnP52194 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
ClgnP52194 Gm13369-201ENSMUST00000119442 987 ntBASIC12.77□□□□□ -0.37
ClgnP52194 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC12.77□□□□□ -0.37
ClgnP52194 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
ClgnP52194 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ClgnP52194 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC12.77□□□□□ -0.37
ClgnP52194 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
ClgnP52194 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ClgnP52194 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC12.77□□□□□ -0.37
ClgnP52194 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC12.77□□□□□ -0.37
ClgnP52194 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
ClgnP52194 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
ClgnP52194 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ClgnP52194 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms