Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Brca1P48754 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Brca1P48754 Grk6-205ENSMUST00000224653 2976 ntBASIC13.76□□□□□ -0.21
Brca1P48754 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Brca1P48754 Gm23912-201ENSMUST00000104687 87 ntBASIC13.76□□□□□ -0.21
Brca1P48754 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
Brca1P48754 Gm14274-201ENSMUST00000117182 615 ntBASIC13.76□□□□□ -0.21
Brca1P48754 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC13.76□□□□□ -0.21
Brca1P48754 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Brca1P48754 Gm9116-201ENSMUST00000192400 1018 ntBASIC13.76□□□□□ -0.21
Brca1P48754 AC168279.1-201ENSMUST00000214611 382 ntBASIC13.76□□□□□ -0.21
Brca1P48754 Gm5434-202ENSMUST00000222384 1451 ntBASIC13.76□□□□□ -0.21
Brca1P48754 Gm5434-201ENSMUST00000071825 1451 ntBASIC13.76□□□□□ -0.21
Brca1P48754 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
Brca1P48754 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Brca1P48754 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Brca1P48754 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC13.76□□□□□ -0.21
Brca1P48754 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Brca1P48754 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Brca1P48754 Zkscan3-208ENSMUST00000224820 5398 ntBASIC13.76□□□□□ -0.21
Brca1P48754 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Brca1P48754 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.76□□□□□ -0.21
Brca1P48754 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Brca1P48754 CT009489.1-201ENSMUST00000227740 1893 ntBASIC13.76□□□□□ -0.21
Brca1P48754 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Brca1P48754 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Brca1P48754 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Brca1P48754 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Brca1P48754 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Brca1P48754 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC13.76□□□□□ -0.21
Brca1P48754 Gm4654-201ENSMUST00000183305 982 ntBASIC13.76□□□□□ -0.21
Brca1P48754 Gm42779-201ENSMUST00000198807 406 ntBASIC13.76□□□□□ -0.21
Brca1P48754 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Brca1P48754 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC13.76□□□□□ -0.21
Brca1P48754 Gm40879-201ENSMUST00000220759 612 ntBASIC13.76□□□□□ -0.21
Brca1P48754 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Brca1P48754 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Brca1P48754 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Brca1P48754 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Brca1P48754 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Brca1P48754 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Brca1P48754 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Brca1P48754 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.75□□□□□ -0.21
Brca1P48754 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Brca1P48754 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Brca1P48754 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Brca1P48754 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC13.75□□□□□ -0.21
Brca1P48754 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Brca1P48754 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Brca1P48754 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Brca1P48754 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Brca1P48754 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Brca1P48754 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Brca1P48754 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Brca1P48754 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Brca1P48754 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Brca1P48754 Gm14193-201ENSMUST00000105067 153 ntBASIC13.75□□□□□ -0.21
Brca1P48754 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Brca1P48754 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Brca1P48754 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Brca1P48754 Gm13022-201ENSMUST00000121181 285 ntBASIC13.75□□□□□ -0.21
Brca1P48754 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC13.75□□□□□ -0.21
Brca1P48754 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Brca1P48754 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC13.75□□□□□ -0.21
Brca1P48754 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC13.75□□□□□ -0.21
Brca1P48754 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Brca1P48754 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Brca1P48754 Gm45856-201ENSMUST00000212752 416 ntBASIC13.75□□□□□ -0.21
Brca1P48754 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Brca1P48754 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Brca1P48754 Gm45266-201ENSMUST00000210111 2173 ntBASIC13.75□□□□□ -0.21
Brca1P48754 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Brca1P48754 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Brca1P48754 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Brca1P48754 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Brca1P48754 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Brca1P48754 Gm6903-201ENSMUST00000160509 1366 ntBASIC13.75□□□□□ -0.21
Brca1P48754 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Brca1P48754 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC13.75□□□□□ -0.21
Brca1P48754 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Brca1P48754 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Brca1P48754 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Brca1P48754 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Brca1P48754 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Brca1P48754 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Brca1P48754 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Brca1P48754 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Brca1P48754 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Brca1P48754 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Brca1P48754 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Brca1P48754 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Brca1P48754 Gm12948-201ENSMUST00000119406 682 ntBASIC13.74□□□□□ -0.21
Brca1P48754 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC13.74□□□□□ -0.21
Brca1P48754 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Brca1P48754 Gm18204-201ENSMUST00000209835 793 ntBASIC13.74□□□□□ -0.21
Brca1P48754 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC13.74□□□□□ -0.21
Brca1P48754 Gm45594-201ENSMUST00000211717 241 ntBASIC13.74□□□□□ -0.21
Brca1P48754 Gm2553-201ENSMUST00000215986 605 ntBASIC13.74□□□□□ -0.21
Brca1P48754 CT025602.2-201ENSMUST00000226553 772 ntBASIC13.74□□□□□ -0.21
Brca1P48754 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms