Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Gm9487-201ENSMUST00000216600 472 ntBASIC18.29■□□□□ 0.52
Chd1P40201 AC123694.1-201ENSMUST00000219525 644 ntTSL 5 BASIC18.29■□□□□ 0.52
Chd1P40201 Gm4735-201ENSMUST00000138679 1302 ntBASIC18.29■□□□□ 0.52
Chd1P40201 Gm5855-201ENSMUST00000200240 1305 ntBASIC18.29■□□□□ 0.52
Chd1P40201 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chd1P40201 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Chd1P40201 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chd1P40201 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Chd1P40201 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Chd1P40201 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Chd1P40201 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Chd1P40201 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Chd1P40201 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC18.28■□□□□ 0.52
Chd1P40201 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Chd1P40201 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Chd1P40201 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Chd1P40201 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Chd1P40201 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Chd1P40201 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Chd1P40201 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Chd1P40201 Gm6189-201ENSMUST00000164487 2082 ntBASIC18.28■□□□□ 0.52
Chd1P40201 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Chd1P40201 Syngr4-202ENSMUST00000120299 722 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Chd1P40201 Gm25569-201ENSMUST00000157175 131 ntBASIC18.28■□□□□ 0.52
Chd1P40201 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Chd1P40201 Timm9-210ENSMUST00000221892 734 ntTSL 5 BASIC18.28■□□□□ 0.52
Chd1P40201 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Chd1P40201 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Chd1P40201 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Chd1P40201 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Chd1P40201 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Chd1P40201 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Chd1P40201 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
Chd1P40201 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Chd1P40201 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Chd1P40201 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Chd1P40201 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Chd1P40201 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Chd1P40201 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Chd1P40201 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Chd1P40201 Gm25562-201ENSMUST00000104608 133 ntBASIC18.27■□□□□ 0.52
Chd1P40201 Plac8-203ENSMUST00000112910 1224 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Chd1P40201 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC18.27■□□□□ 0.52
Chd1P40201 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC18.27■□□□□ 0.52
Chd1P40201 Gm5267-201ENSMUST00000191574 1045 ntBASIC18.27■□□□□ 0.52
Chd1P40201 Gm9204-201ENSMUST00000212641 947 ntBASIC18.27■□□□□ 0.52
Chd1P40201 Gm46224-201ENSMUST00000220221 1242 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Chd1P40201 AC164437.3-201ENSMUST00000228323 347 ntBASIC18.27■□□□□ 0.52
Chd1P40201 Myl9-201ENSMUST00000088552 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Chd1P40201 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Chd1P40201 Gm8038-201ENSMUST00000164674 2044 ntBASIC18.27■□□□□ 0.52
Chd1P40201 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Chd1P40201 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC18.27■□□□□ 0.52
Chd1P40201 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Chd1P40201 AC174797.1-201ENSMUST00000224339 1649 ntBASIC18.27■□□□□ 0.51
Chd1P40201 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Chd1P40201 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Chd1P40201 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Chd1P40201 Poc1a-209ENSMUST00000216228 1431 ntTSL 5 BASIC18.27■□□□□ 0.51
Chd1P40201 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
Chd1P40201 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Chd1P40201 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Chd1P40201 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Chd1P40201 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Chd1P40201 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Chd1P40201 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Chd1P40201 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Chd1P40201 AC140409.3-201ENSMUST00000215601 358 ntTSL 3 BASIC18.26■□□□□ 0.51
Chd1P40201 Gm5449-201ENSMUST00000081132 357 ntBASIC18.26■□□□□ 0.51
Chd1P40201 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Chd1P40201 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Chd1P40201 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Chd1P40201 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Chd1P40201 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Chd1P40201 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Chd1P40201 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Chd1P40201 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Chd1P40201 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Chd1P40201 Fopnl-202ENSMUST00000120707 1414 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Chd1P40201 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Chd1P40201 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Chd1P40201 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
Chd1P40201 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Chd1P40201 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Chd1P40201 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Chd1P40201 Gm13094-201ENSMUST00000117930 409 ntBASIC18.26■□□□□ 0.51
Chd1P40201 Gm12461-201ENSMUST00000120231 1239 ntBASIC18.26■□□□□ 0.51
Chd1P40201 Gm29808-201ENSMUST00000194419 468 ntBASIC18.26■□□□□ 0.51
Chd1P40201 Gm7192-201ENSMUST00000210793 1137 ntBASIC18.26■□□□□ 0.51
Chd1P40201 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Chd1P40201 Olfr60-201ENSMUST00000075470 936 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Chd1P40201 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
Chd1P40201 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Chd1P40201 AC126262.1-201ENSMUST00000221802 1904 ntBASIC18.26■□□□□ 0.51
Chd1P40201 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
Chd1P40201 Gm37736-201ENSMUST00000193564 2802 ntBASIC18.25■□□□□ 0.51
Chd1P40201 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Chd1P40201 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Chd1P40201 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
Chd1P40201 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms