Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vcam1P29533 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vcam1P29533 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vcam1P29533 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Vcam1P29533 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Vcam1P29533 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vcam1P29533 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Vcam1P29533 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Vcam1P29533 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC14.29□□□□□ -0.12
Vcam1P29533 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vcam1P29533 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Vcam1P29533 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Vcam1P29533 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vcam1P29533 Gm11509-201ENSMUST00000117358 325 ntBASIC14.29□□□□□ -0.12
Vcam1P29533 Gm13611-201ENSMUST00000118269 318 ntBASIC14.29□□□□□ -0.12
Vcam1P29533 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC14.29□□□□□ -0.12
Vcam1P29533 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vcam1P29533 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Vcam1P29533 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC14.29□□□□□ -0.12
Vcam1P29533 Gm9211-201ENSMUST00000182882 975 ntBASIC14.29□□□□□ -0.12
Vcam1P29533 Mir7677-201ENSMUST00000184226 67 ntBASIC14.29□□□□□ -0.12
Vcam1P29533 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Vcam1P29533 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC14.29□□□□□ -0.12
Vcam1P29533 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC14.29□□□□□ -0.12
Vcam1P29533 Gm18711-201ENSMUST00000199341 750 ntBASIC14.29□□□□□ -0.12
Vcam1P29533 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Vcam1P29533 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vcam1P29533 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vcam1P29533 Gm21811-201ENSMUST00000096485 930 ntBASIC14.29□□□□□ -0.12
Vcam1P29533 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.29□□□□□ -0.12
Vcam1P29533 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vcam1P29533 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vcam1P29533 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Vcam1P29533 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vcam1P29533 Gm9361-201ENSMUST00000198695 1507 ntBASIC14.29□□□□□ -0.12
Vcam1P29533 Gm5847-201ENSMUST00000178959 1595 ntBASIC14.29□□□□□ -0.12
Vcam1P29533 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vcam1P29533 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vcam1P29533 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vcam1P29533 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vcam1P29533 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC14.28□□□□□ -0.12
Vcam1P29533 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vcam1P29533 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
Vcam1P29533 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vcam1P29533 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Vcam1P29533 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vcam1P29533 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vcam1P29533 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vcam1P29533 Mir680-2-201ENSMUST00000102163 110 ntBASIC14.28□□□□□ -0.12
Vcam1P29533 Gm23251-201ENSMUST00000103773 110 ntBASIC14.28□□□□□ -0.12
Vcam1P29533 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Vcam1P29533 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Vcam1P29533 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vcam1P29533 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vcam1P29533 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Vcam1P29533 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Vcam1P29533 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Vcam1P29533 Gm12196-201ENSMUST00000120954 262 ntBASIC14.28□□□□□ -0.12
Vcam1P29533 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vcam1P29533 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Vcam1P29533 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Vcam1P29533 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Vcam1P29533 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
Vcam1P29533 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vcam1P29533 Gm25881-201ENSMUST00000157783 103 ntBASIC14.28□□□□□ -0.12
Vcam1P29533 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vcam1P29533 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
Vcam1P29533 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Vcam1P29533 Gm5732-201ENSMUST00000182596 1007 ntBASIC14.28□□□□□ -0.12
Vcam1P29533 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC14.28□□□□□ -0.12
Vcam1P29533 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC14.28□□□□□ -0.12
Vcam1P29533 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Vcam1P29533 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Vcam1P29533 Gm18393-201ENSMUST00000208349 1131 ntBASIC14.28□□□□□ -0.12
Vcam1P29533 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Vcam1P29533 AC154276.3-201ENSMUST00000227643 998 ntBASIC14.28□□□□□ -0.12
Vcam1P29533 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vcam1P29533 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vcam1P29533 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vcam1P29533 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vcam1P29533 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vcam1P29533 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Vcam1P29533 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vcam1P29533 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Vcam1P29533 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vcam1P29533 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vcam1P29533 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC14.28□□□□□ -0.12
Vcam1P29533 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vcam1P29533 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vcam1P29533 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vcam1P29533 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vcam1P29533 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vcam1P29533 Gm44260-201ENSMUST00000204946 2094 ntBASIC14.27□□□□□ -0.12
Vcam1P29533 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vcam1P29533 AC123834.1-201ENSMUST00000225346 2043 ntBASIC14.27□□□□□ -0.12
Vcam1P29533 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vcam1P29533 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vcam1P29533 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Vcam1P29533 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vcam1P29533 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms