Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Col2a1P28481 Gm37644-201ENSMUST00000192190 2270 ntBASIC13.99□□□□□ -0.17
Col2a1P28481 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col2a1P28481 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col2a1P28481 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col2a1P28481 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col2a1P28481 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col2a1P28481 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Col2a1P28481 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col2a1P28481 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Col2a1P28481 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col2a1P28481 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC13.99□□□□□ -0.17
Col2a1P28481 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Col2a1P28481 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col2a1P28481 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC13.99□□□□□ -0.17
Col2a1P28481 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Col2a1P28481 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Col2a1P28481 Gm12579-201ENSMUST00000118040 783 ntBASIC13.99□□□□□ -0.17
Col2a1P28481 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col2a1P28481 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Col2a1P28481 Gm6397-201ENSMUST00000161973 1069 ntBASIC13.99□□□□□ -0.17
Col2a1P28481 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC13.99□□□□□ -0.17
Col2a1P28481 Gm5051-201ENSMUST00000204085 485 ntBASIC13.99□□□□□ -0.17
Col2a1P28481 Gm45118-201ENSMUST00000208928 825 ntBASIC13.99□□□□□ -0.17
Col2a1P28481 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC13.99□□□□□ -0.17
Col2a1P28481 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Col2a1P28481 Gm7551-201ENSMUST00000089593 1074 ntBASIC13.99□□□□□ -0.17
Col2a1P28481 AC173482.6-201ENSMUST00000225889 1741 ntBASIC13.99□□□□□ -0.17
Col2a1P28481 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col2a1P28481 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC13.98□□□□□ -0.17
Col2a1P28481 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col2a1P28481 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col2a1P28481 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col2a1P28481 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col2a1P28481 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC13.98□□□□□ -0.17
Col2a1P28481 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col2a1P28481 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col2a1P28481 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col2a1P28481 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col2a1P28481 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col2a1P28481 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col2a1P28481 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col2a1P28481 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Col2a1P28481 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Col2a1P28481 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Col2a1P28481 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col2a1P28481 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
Col2a1P28481 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC13.98□□□□□ -0.17
Col2a1P28481 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col2a1P28481 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC13.98□□□□□ -0.17
Col2a1P28481 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col2a1P28481 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Col2a1P28481 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col2a1P28481 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col2a1P28481 Gm15432-201ENSMUST00000121106 195 ntBASIC13.98□□□□□ -0.17
Col2a1P28481 Mup-ps26-201ENSMUST00000121751 202 ntBASIC13.98□□□□□ -0.17
Col2a1P28481 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col2a1P28481 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC13.98□□□□□ -0.17
Col2a1P28481 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Col2a1P28481 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC13.98□□□□□ -0.17
Col2a1P28481 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col2a1P28481 CT009713.8-202ENSMUST00000224732 385 ntBASIC13.98□□□□□ -0.17
Col2a1P28481 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col2a1P28481 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Col2a1P28481 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC13.98□□□□□ -0.17
Col2a1P28481 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Col2a1P28481 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col2a1P28481 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col2a1P28481 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col2a1P28481 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col2a1P28481 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col2a1P28481 Gm21998-201ENSMUST00000117552 1308 ntBASIC13.97□□□□□ -0.17
Col2a1P28481 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col2a1P28481 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col2a1P28481 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col2a1P28481 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Col2a1P28481 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col2a1P28481 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Col2a1P28481 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col2a1P28481 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Col2a1P28481 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.97□□□□□ -0.17
Col2a1P28481 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Col2a1P28481 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Col2a1P28481 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col2a1P28481 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC13.97□□□□□ -0.17
Col2a1P28481 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Col2a1P28481 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col2a1P28481 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col2a1P28481 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col2a1P28481 Gm15782-201ENSMUST00000121073 445 ntBASIC13.97□□□□□ -0.17
Col2a1P28481 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Col2a1P28481 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC13.97□□□□□ -0.17
Col2a1P28481 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC13.97□□□□□ -0.17
Col2a1P28481 Gm9034-201ENSMUST00000182071 1005 ntBASIC13.97□□□□□ -0.17
Col2a1P28481 Gm19287-201ENSMUST00000203190 358 ntBASIC13.97□□□□□ -0.17
Col2a1P28481 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Col2a1P28481 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC13.97□□□□□ -0.17
Col2a1P28481 Gm6867-201ENSMUST00000219165 425 ntBASIC13.97□□□□□ -0.17
Col2a1P28481 AC112945.1-201ENSMUST00000226413 514 ntBASIC13.97□□□□□ -0.17
Col2a1P28481 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms