Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC14.45□□□□□ -0.1
Col1a1P11087 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Col1a1P11087 Gm19166-201ENSMUST00000196041 1063 ntBASIC14.45□□□□□ -0.1
Col1a1P11087 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col1a1P11087 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC14.45□□□□□ -0.1
Col1a1P11087 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC14.45□□□□□ -0.1
Col1a1P11087 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Col1a1P11087 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col1a1P11087 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col1a1P11087 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Col1a1P11087 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Col1a1P11087 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col1a1P11087 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col1a1P11087 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Col1a1P11087 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Col1a1P11087 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col1a1P11087 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Col1a1P11087 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col1a1P11087 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col1a1P11087 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Col1a1P11087 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Col1a1P11087 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col1a1P11087 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col1a1P11087 Gm6210-201ENSMUST00000204734 1942 ntBASIC14.44□□□□□ -0.1
Col1a1P11087 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col1a1P11087 Gm22920-201ENSMUST00000102175 109 ntBASIC14.44□□□□□ -0.1
Col1a1P11087 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
Col1a1P11087 Gm22711-201ENSMUST00000116890 133 ntBASIC14.44□□□□□ -0.1
Col1a1P11087 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col1a1P11087 Gm4879-201ENSMUST00000122190 1272 ntBASIC14.44□□□□□ -0.1
Col1a1P11087 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC14.44□□□□□ -0.1
Col1a1P11087 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Col1a1P11087 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC14.44□□□□□ -0.1
Col1a1P11087 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC14.44□□□□□ -0.1
Col1a1P11087 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col1a1P11087 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col1a1P11087 CT485606.1-201ENSMUST00000213187 878 ntBASIC14.44□□□□□ -0.1
Col1a1P11087 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC14.44□□□□□ -0.1
Col1a1P11087 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col1a1P11087 Gm26035-201ENSMUST00000083065 308 ntBASIC14.44□□□□□ -0.1
Col1a1P11087 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC14.44□□□□□ -0.1
Col1a1P11087 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col1a1P11087 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Col1a1P11087 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Col1a1P11087 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col1a1P11087 AC154671.1-201ENSMUST00000228617 1578 ntBASIC14.44□□□□□ -0.1
Col1a1P11087 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col1a1P11087 Gm42840-201ENSMUST00000200303 2251 ntBASIC14.44□□□□□ -0.1
Col1a1P11087 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC14.44□□□□□ -0.1
Col1a1P11087 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC14.44□□□□□ -0.1
Col1a1P11087 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Col1a1P11087 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Col1a1P11087 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC14.44□□□□□ -0.1
Col1a1P11087 Gm9361-201ENSMUST00000198695 1507 ntBASIC14.44□□□□□ -0.1
Col1a1P11087 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col1a1P11087 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col1a1P11087 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Col1a1P11087 Gm3052-202ENSMUST00000188254 2224 ntBASIC14.44□□□□□ -0.1
Col1a1P11087 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Col1a1P11087 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Col1a1P11087 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
Col1a1P11087 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col1a1P11087 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col1a1P11087 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col1a1P11087 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col1a1P11087 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col1a1P11087 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col1a1P11087 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col1a1P11087 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
Col1a1P11087 Gm15725-201ENSMUST00000119947 1090 ntBASIC14.44□□□□□ -0.1
Col1a1P11087 Gm13182-201ENSMUST00000122241 312 ntBASIC14.44□□□□□ -0.1
Col1a1P11087 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Col1a1P11087 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC14.44□□□□□ -0.1
Col1a1P11087 Gm3793-201ENSMUST00000204973 672 ntBASIC14.44□□□□□ -0.1
Col1a1P11087 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Col1a1P11087 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC14.44□□□□□ -0.1
Col1a1P11087 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Col1a1P11087 Gm6867-201ENSMUST00000219165 425 ntBASIC14.44□□□□□ -0.1
Col1a1P11087 AC124433.1-201ENSMUST00000224483 1063 ntBASIC14.44□□□□□ -0.1
Col1a1P11087 AC093022.5-201ENSMUST00000226841 1079 ntBASIC14.44□□□□□ -0.1
Col1a1P11087 AC121960.1-201ENSMUST00000227982 564 ntBASIC14.44□□□□□ -0.1
Col1a1P11087 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col1a1P11087 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Col1a1P11087 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col1a1P11087 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
Col1a1P11087 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Col1a1P11087 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col1a1P11087 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col1a1P11087 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Col1a1P11087 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col1a1P11087 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col1a1P11087 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col1a1P11087 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col1a1P11087 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Col1a1P11087 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col1a1P11087 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Col1a1P11087 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col1a1P11087 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Col1a1P11087 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Col1a1P11087 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms