Protein–RNA interactions for Protein: P09793

Ctla4, Cytotoxic T-lymphocyte protein 4, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctla4P09793 Retreg1-206ENSMUST00000228306 1430 ntBASIC11.6□□□□□ -0.55
Ctla4P09793 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ctla4P09793 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ctla4P09793 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ctla4P09793 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ctla4P09793 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ctla4P09793 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ctla4P09793 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ctla4P09793 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ctla4P09793 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ctla4P09793 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC11.6□□□□□ -0.55
Ctla4P09793 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ctla4P09793 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
Ctla4P09793 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ctla4P09793 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ctla4P09793 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ctla4P09793 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ctla4P09793 Gm14726-201ENSMUST00000120623 896 ntBASIC11.6□□□□□ -0.55
Ctla4P09793 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC11.6□□□□□ -0.55
Ctla4P09793 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ctla4P09793 Gm17376-201ENSMUST00000166016 84 ntBASIC11.6□□□□□ -0.55
Ctla4P09793 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC11.6□□□□□ -0.55
Ctla4P09793 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC11.6□□□□□ -0.55
Ctla4P09793 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ctla4P09793 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Ctla4P09793 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ctla4P09793 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ctla4P09793 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ctla4P09793 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ctla4P09793 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ctla4P09793 Gm2673-201ENSMUST00000120958 1608 ntBASIC11.6□□□□□ -0.55
Ctla4P09793 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ctla4P09793 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ctla4P09793 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ctla4P09793 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ctla4P09793 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ctla4P09793 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
Ctla4P09793 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ctla4P09793 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ctla4P09793 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC11.59□□□□□ -0.55
Ctla4P09793 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ctla4P09793 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ctla4P09793 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ctla4P09793 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ctla4P09793 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ctla4P09793 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ctla4P09793 Gm4864-201ENSMUST00000219894 1461 ntBASIC11.59□□□□□ -0.55
Ctla4P09793 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ctla4P09793 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Ctla4P09793 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ctla4P09793 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Ctla4P09793 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC11.59□□□□□ -0.55
Ctla4P09793 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC11.59□□□□□ -0.55
Ctla4P09793 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC11.59□□□□□ -0.55
Ctla4P09793 Gm26083-201ENSMUST00000157904 193 ntBASIC11.59□□□□□ -0.55
Ctla4P09793 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC11.59□□□□□ -0.55
Ctla4P09793 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ctla4P09793 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC11.59□□□□□ -0.55
Ctla4P09793 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC11.59□□□□□ -0.55
Ctla4P09793 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC11.59□□□□□ -0.55
Ctla4P09793 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ctla4P09793 AC113031.8-201ENSMUST00000227856 631 ntBASIC11.59□□□□□ -0.55
Ctla4P09793 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ctla4P09793 Gm10076-201ENSMUST00000073238 384 ntBASIC11.59□□□□□ -0.55
Ctla4P09793 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ctla4P09793 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ctla4P09793 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ctla4P09793 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ctla4P09793 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ctla4P09793 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ctla4P09793 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ctla4P09793 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ctla4P09793 Gm43721-201ENSMUST00000199677 2313 ntBASIC11.59□□□□□ -0.55
Ctla4P09793 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ctla4P09793 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Ctla4P09793 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ctla4P09793 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ctla4P09793 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ctla4P09793 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC11.59□□□□□ -0.55
Ctla4P09793 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ctla4P09793 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.55
Ctla4P09793 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.55
Ctla4P09793 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Ctla4P09793 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.55
Ctla4P09793 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ctla4P09793 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ctla4P09793 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ctla4P09793 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Ctla4P09793 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ctla4P09793 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Ctla4P09793 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ctla4P09793 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ctla4P09793 Gm22323-201ENSMUST00000103832 109 ntBASIC11.58□□□□□ -0.56
Ctla4P09793 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ctla4P09793 Gm13570-201ENSMUST00000140763 309 ntBASIC11.58□□□□□ -0.56
Ctla4P09793 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ctla4P09793 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ctla4P09793 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Ctla4P09793 Gm9022-201ENSMUST00000182482 992 ntBASIC11.58□□□□□ -0.56
Ctla4P09793 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms