Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC9.89□□□□□ -0.83
Hoxd3P09027 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Hoxd3P09027 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Hoxd3P09027 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Hoxd3P09027 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Hoxd3P09027 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Hoxd3P09027 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
Hoxd3P09027 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Hoxd3P09027 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC9.89□□□□□ -0.83
Hoxd3P09027 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
Hoxd3P09027 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Hoxd3P09027 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Hoxd3P09027 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC9.89□□□□□ -0.83
Hoxd3P09027 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Hoxd3P09027 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Hoxd3P09027 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC9.89□□□□□ -0.83
Hoxd3P09027 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Hoxd3P09027 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Hoxd3P09027 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Hoxd3P09027 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Hoxd3P09027 Gm23673-201ENSMUST00000157474 298 ntBASIC9.89□□□□□ -0.83
Hoxd3P09027 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC9.89□□□□□ -0.83
Hoxd3P09027 Gm2991-201ENSMUST00000173338 480 ntBASIC9.89□□□□□ -0.83
Hoxd3P09027 Gm16617-201ENSMUST00000181008 675 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Hoxd3P09027 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC9.89□□□□□ -0.83
Hoxd3P09027 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC9.89□□□□□ -0.83
Hoxd3P09027 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC9.89□□□□□ -0.83
Hoxd3P09027 Gm7783-201ENSMUST00000204795 781 ntBASIC9.89□□□□□ -0.83
Hoxd3P09027 Gm44738-201ENSMUST00000206393 371 ntTSL 2 BASIC9.89□□□□□ -0.83
Hoxd3P09027 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC9.89□□□□□ -0.83
Hoxd3P09027 4930442G15Rik-201ENSMUST00000213112 1000 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Hoxd3P09027 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Hoxd3P09027 Gm1715-201ENSMUST00000213681 1018 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Hoxd3P09027 AC153932.1-201ENSMUST00000218558 787 ntBASIC9.89□□□□□ -0.83
Hoxd3P09027 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Hoxd3P09027 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Hoxd3P09027 Olfr1076-201ENSMUST00000076263 942 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Hoxd3P09027 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC9.89□□□□□ -0.83
Hoxd3P09027 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Hoxd3P09027 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Hoxd3P09027 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC9.89□□□□□ -0.83
Hoxd3P09027 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC9.89□□□□□ -0.83
Hoxd3P09027 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Hoxd3P09027 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Hoxd3P09027 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Hoxd3P09027 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Hoxd3P09027 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Hoxd3P09027 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Hoxd3P09027 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Hoxd3P09027 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Hoxd3P09027 AC158595.1-201ENSMUST00000217989 1435 ntBASIC9.89□□□□□ -0.83
Hoxd3P09027 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Hoxd3P09027 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Hoxd3P09027 Gm6992-201ENSMUST00000217973 1607 ntBASIC9.89□□□□□ -0.83
Hoxd3P09027 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Hoxd3P09027 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
Hoxd3P09027 Gm26684-202ENSMUST00000228229 8257 ntBASIC9.89□□□□□ -0.83
Hoxd3P09027 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Hoxd3P09027 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
Hoxd3P09027 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC9.88□□□□□ -0.83
Hoxd3P09027 Pbld1-202ENSMUST00000178684 2404 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Hoxd3P09027 AC154747.3-201ENSMUST00000224471 3470 ntBASIC9.88□□□□□ -0.83
Hoxd3P09027 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Hoxd3P09027 AC139054.1-201ENSMUST00000226898 1598 ntBASIC9.88□□□□□ -0.83
Hoxd3P09027 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Hoxd3P09027 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Hoxd3P09027 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Hoxd3P09027 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Hoxd3P09027 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Hoxd3P09027 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Hoxd3P09027 Gm9924-202ENSMUST00000192760 2311 ntBASIC9.88□□□□□ -0.83
Hoxd3P09027 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Hoxd3P09027 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Hoxd3P09027 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Hoxd3P09027 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Hoxd3P09027 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Hoxd3P09027 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Hoxd3P09027 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Hoxd3P09027 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Hoxd3P09027 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Hoxd3P09027 Gm14921-201ENSMUST00000118643 908 ntBASIC9.88□□□□□ -0.83
Hoxd3P09027 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC9.88□□□□□ -0.83
Hoxd3P09027 Gm13350-201ENSMUST00000120519 479 ntBASIC9.88□□□□□ -0.83
Hoxd3P09027 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC9.88□□□□□ -0.83
Hoxd3P09027 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Hoxd3P09027 Gm15882-201ENSMUST00000161344 855 ntTSL 3 BASIC9.88□□□□□ -0.83
Hoxd3P09027 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Hoxd3P09027 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Hoxd3P09027 Gm3159-203ENSMUST00000177764 618 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Hoxd3P09027 Gm3269-202ENSMUST00000178137 618 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Hoxd3P09027 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Hoxd3P09027 Gm3594-203ENSMUST00000179747 618 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Hoxd3P09027 Peak1os-201ENSMUST00000181444 1264 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Hoxd3P09027 Eloc-206ENSMUST00000186948 641 ntAPPRIS P1 TSL 2 BASIC9.88□□□□□ -0.83
Hoxd3P09027 Gm18352-201ENSMUST00000189113 902 ntBASIC9.88□□□□□ -0.83
Hoxd3P09027 Gm37517-201ENSMUST00000194004 1289 ntBASIC9.88□□□□□ -0.83
Hoxd3P09027 Gm38341-201ENSMUST00000195357 515 ntBASIC9.88□□□□□ -0.83
Hoxd3P09027 Gm43758-201ENSMUST00000199500 367 ntBASIC9.88□□□□□ -0.83
Hoxd3P09027 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC9.88□□□□□ -0.83
Hoxd3P09027 Gm45865-201ENSMUST00000211815 945 ntBASIC9.88□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 82.6 ms