Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Hoxc8P09025 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Hoxc8P09025 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC13.21□□□□□ -0.29
Hoxc8P09025 Gm18893-201ENSMUST00000198416 943 ntBASIC13.21□□□□□ -0.29
Hoxc8P09025 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC13.21□□□□□ -0.29
Hoxc8P09025 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
Hoxc8P09025 AC122876.1-201ENSMUST00000217619 825 ntBASIC13.21□□□□□ -0.29
Hoxc8P09025 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Hoxc8P09025 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hoxc8P09025 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hoxc8P09025 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC13.21□□□□□ -0.29
Hoxc8P09025 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hoxc8P09025 AC241621.2-201ENSMUST00000223991 2151 ntBASIC13.21□□□□□ -0.3
Hoxc8P09025 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Hoxc8P09025 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Hoxc8P09025 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Hoxc8P09025 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Hoxc8P09025 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Hoxc8P09025 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hoxc8P09025 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC13.2□□□□□ -0.3
Hoxc8P09025 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Hoxc8P09025 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hoxc8P09025 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Hoxc8P09025 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hoxc8P09025 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hoxc8P09025 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hoxc8P09025 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC13.2□□□□□ -0.3
Hoxc8P09025 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hoxc8P09025 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Hoxc8P09025 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC13.2□□□□□ -0.3
Hoxc8P09025 Gm10152-201ENSMUST00000193475 1344 ntBASIC13.2□□□□□ -0.3
Hoxc8P09025 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hoxc8P09025 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC13.2□□□□□ -0.3
Hoxc8P09025 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hoxc8P09025 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC13.2□□□□□ -0.3
Hoxc8P09025 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hoxc8P09025 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hoxc8P09025 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Hoxc8P09025 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hoxc8P09025 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hoxc8P09025 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Hoxc8P09025 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hoxc8P09025 Gm14314-201ENSMUST00000118225 1015 ntBASIC13.2□□□□□ -0.3
Hoxc8P09025 Gm12029-201ENSMUST00000120073 832 ntBASIC13.2□□□□□ -0.3
Hoxc8P09025 Gm14460-201ENSMUST00000121511 639 ntBASIC13.2□□□□□ -0.3
Hoxc8P09025 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC13.2□□□□□ -0.3
Hoxc8P09025 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Hoxc8P09025 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC13.2□□□□□ -0.3
Hoxc8P09025 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Hoxc8P09025 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
Hoxc8P09025 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Hoxc8P09025 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Hoxc8P09025 Gm45550-201ENSMUST00000209380 946 ntBASIC13.2□□□□□ -0.3
Hoxc8P09025 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Hoxc8P09025 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC13.2□□□□□ -0.3
Hoxc8P09025 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC13.2□□□□□ -0.3
Hoxc8P09025 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Hoxc8P09025 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hoxc8P09025 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Hoxc8P09025 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hoxc8P09025 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hoxc8P09025 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hoxc8P09025 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hoxc8P09025 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hoxc8P09025 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Hoxc8P09025 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Hoxc8P09025 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Hoxc8P09025 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hoxc8P09025 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hoxc8P09025 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hoxc8P09025 Gm14150-201ENSMUST00000122404 1354 ntBASIC13.2□□□□□ -0.3
Hoxc8P09025 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Hoxc8P09025 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hoxc8P09025 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hoxc8P09025 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Hoxc8P09025 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC13.19□□□□□ -0.3
Hoxc8P09025 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Hoxc8P09025 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hoxc8P09025 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hoxc8P09025 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hoxc8P09025 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hoxc8P09025 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Hoxc8P09025 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hoxc8P09025 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Hoxc8P09025 Gm9129-201ENSMUST00000218173 1689 ntBASIC13.19□□□□□ -0.3
Hoxc8P09025 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Hoxc8P09025 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hoxc8P09025 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hoxc8P09025 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hoxc8P09025 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hoxc8P09025 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Hoxc8P09025 Gm11663-201ENSMUST00000117888 290 ntBASIC13.19□□□□□ -0.3
Hoxc8P09025 Gm15004-201ENSMUST00000119192 630 ntBASIC13.19□□□□□ -0.3
Hoxc8P09025 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Hoxc8P09025 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Hoxc8P09025 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Hoxc8P09025 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Hoxc8P09025 AC130671.2-201ENSMUST00000227224 1621 ntBASIC13.19□□□□□ -0.3
Hoxc8P09025 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hoxc8P09025 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms